Diversity and community composition of nirS-type denitrifying bacteria and ammonia-oxidizing archaea in biofilm samples attached to bio-substrate and abio-substrates in integrated ecological floating bed systems

Distribution of ammonia-oxidizing archaea and bacteria along an engineered coastal ecosystem in subtropical China

(2021) Yong-Feng Wang et al.   ECOTOXICOLOGY

nirS-type denitrifying bacterial communities in relation to soil physicochemical conditions and soil depths of two montane riparian meadows in North China

(2020) Xiaoli Han et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Phytoremediation of TSS, NH3-N and COD from Sewage Wastewater by Lemna minor L., Salvinia minima, Ipomea aquatica and Centella asiatica

(2020) Nur Izzah Hamna Abdul Aziz et al.   Applied Sciences-Basel

Long term combined fertilization and soil aggregate size on the denitrification and community of denitrifiers

(2020) Pei-Pei Li et al.   APPLIED SOIL ECOLOGY

Abundance and community structure of ammonium monooxygenase (amoA) genes in the wet season of liaohe estuary sediments

(2020) Hongxia Ming et al.   CONTINENTAL SHELF RESEARCH

The response of ammonia oxidizing archaea and bacteria in relation to heterotrophs under different carbon and nitrogen amendments in two agricultural soils

(2020) Rui Xiao et al.   APPLIED SOIL ECOLOGY

Plants and microbes' responses to the net nitrification rates of chemical fertilizers in vegetable soils

(2020) Azmerry Khanom et al.   APPLIED SOIL ECOLOGY

An RNA-based study of the distribution of ammonia-oxidizing microorganisms in vertical sediment

(2020) Tong-tong Liu et al.   ECOLOGICAL INDICATORS

Plastic film mulching affects N2O emission and ammonia oxidizers in drip irrigated potato soil in northwest China

(2020) Wen Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Giving waterbodies the treatment they need: A critical review of the application of constructed floating wetlands

(2019) Ran Bi et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Community structure and functional diversity of epiphytic bacteria and planktonic bacteria on submerged macrophytes in Caohai Lake, southwest of China

(2019) Dingbo Yan et al.   ANNALS OF MICROBIOLOGY

Response of submerged macrophytes and leaf biofilms to the decline phase of Microcystis aeruginosa: Antioxidant response, ultrastructure, microbial properties, and potential mechanism

(2019) Qi Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Simultaneous improving nitrogen removal and decreasing greenhouse gas emission with biofilm carriers addition in ecological floating bed

(2019) Shanshan Sun et al.   BIORESOURCE TECHNOLOGY

Floating treatment wetlands supplemented with aeration and biofilm attachment surfaces for efficient domestic wastewater treatment

(2019) Jason B.K. Park et al.   ECOLOGICAL ENGINEERING

Response of submerged macrophytes and periphyton biofilm to water flow in eutrophic environment: Plant structural, physicochemical and microbial properties

(2019) Qi Li et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Bacterioplankton community in response to biological filters (clam, biofilm, and macrophytes) in an integrated aquaculture wastewater bioremediation system

(2019) Betina Lukwambe et al.   ENVIRONMENTAL POLLUTION

Ecological floating bed (EFB) for decontamination of polluted water bodies: Design, mechanism and performance

(2019) Kundan Samal et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

OUP accepted manuscript

(2018)   BIOINFORMATICS

Response of biofilms-leaves of two submerged macrophytes to high ammonium

(2018) Lixue Gong et al.   CHEMOSPHERE

Variations of the nirS-, nirK-, and nosZ-denitrifying bacterial communities in a northern Chinese soil as affected by different long-term irrigation regimes

(2018) Ya-Dong Yang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Pollution control and in situ bioremediation for lake aquaculture using an ecological dam

(2018) Zhifan Ni et al.   JOURNAL OF CLEANER PRODUCTION

The microbial nitrogen-cycling network

(2018) Marcel M. M. Kuypers et al.   NATURE REVIEWS MICROBIOLOGY

Nitrogen loading affects microbes, nitrifiers and denitrifiers attached to submerged macrophyte in constructed wetlands

(2018) Liying Yan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Design and development of a hybrid macrophyte assisted vermifilter for the treatment of dairy wastewater: A statistical and kinetic modelling approach

(2018) Kundan Samal et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Influence of light and temperature on the development and denitrification potential of periphytic biofilms

(2018) Yanhui Zhao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Nitrous oxide emission and denitrifier communities in drip-irrigated calcareous soil as affected by chemical and organic fertilizers

(2018) Rui Tao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Distinct distribution patterns of ammonia-oxidizing archaea and bacteria in sediment and water column of the Yellow River estuary

(2018) Mingcong Li et al.   Scientific Reports

Ammonia-Oxidizing Archaea and Bacteria Differentially Contribute to Ammonia Oxidation in Sediments from Adjacent Waters of Rushan Bay, China

(2018) Hui He et al.   Frontiers in Microbiology

Characterization of microbes and denitrifiers attached to two species of floating plants in the wetlands of Lake Taihu

(2018) Bing Han et al.   PLoS One

The responding and ecological contribution of biofilm-leaves of submerged macrophytes on phenanthrene dissipation in sediments

(2018) Zhenhua Zhao et al.   ENVIRONMENTAL POLLUTION

Ammonium loading disturbed the microbial food webs in biofilms attached to submersed macrophyte Vallisneria natans

(2018) Lingling Yan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Feasibility assessment: application of ecological floating beds for polluted tidal river remediation

(2017) Shaoling Sun et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Characterization of bacterial community in biofilm and sediments of wetlands dominated by aquatic macrophytes

(2016) Si Pang et al.   ECOLOGICAL ENGINEERING

Spatiotemporal Characterization of San Francisco Bay Denitrifying Communities: a Comparison of nirK and nirS Diversity and Abundance

(2016) Jessica A. Lee et al.   MICROBIAL ECOLOGY

The ecology and biogeochemistry of stream biofilms

(2016) Tom J. Battin et al.   NATURE REVIEWS MICROBIOLOGY

Responses of bacterial community structure and denitrifying bacteria in biofilm to submerged macrophytes and nitrate

(2016) Songhe Zhang et al.   Scientific Reports

Investigation of denitrifying microbial communities within an agricultural drainage system fitted with low-grade weirs

(2015) Beth H. Baker et al.   WATER RESEARCH

Aquaculture wastewater quality improvement by water spinach (Ipomoea aquatica Forsskal) floating bed and ecological benefit assessment in ecological agriculture district

(2014) Qiuzhuo Zhang et al.   AQUACULTURAL ENGINEERING

The physiological responses of Vallisneria natans to epiphytic algae with the increase of N and P concentrations in water bodies

(2014) Yu-Zhi Song et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota

(2014) M. Stieglmeier et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Spatio-Temporal Patterns in Rhizosphere Oxygen Profiles in the Emergent Plant Species Acorus calamus

(2014) Wang Wenlin et al.   PLoS One

Intergenomic Comparisons Highlight Modularity of the Denitrification Pathway and Underpin the Importance of Community Structure for N2O Emissions

(2014) Daniel R. H. Graf et al.   PLoS One

In situ bioremediation of surface waters by periphytons

(2013) Yonghong Wu et al.   BIORESOURCE TECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Resident Bacteria on Leaves Enhance Survival of Immigrant Cells ofSalmonella enterica

(2013) Cesar Poza-Carrion et al.   PHYTOPATHOLOGY

Transitions in nirS-type denitrifier diversity, community composition, and biogeochemical activity along the Chesapeake Bay estuary

(2013) Christopher A. Francis et al.   Frontiers in Microbiology

Higher diversity of ammonia/ammonium-oxidizing prokaryotes in constructed freshwater wetland than natural coastal marine wetland

(2012) Yong-Feng Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Constructed Wetlands With Floating Emergent Macrophytes: An Innovative Stormwater Treatment Technology

(2012) T. R. Headley et al.   CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY

Effects of five macrophytes on nitrogen remediation and mass balance in wetland mesocosms

(2012) Maurizio Borin et al.   ECOLOGICAL ENGINEERING

Microbial biofilm structure and organic matter use in mediterranean streams

(2012) Anna M. Romaní et al.   HYDROBIOLOGIA

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Differential responses of nirK- and nirS-carrying bacteria to denitrifying conditions in the anoxic rice field soil

(2011) Quan Yuan et al.   Environmental Microbiology Reports

Soil Resources Influence Spatial Patterns of Denitrifying Communities at Scales Compatible with Land Management

(2010) K. Enwall et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecological and evolutionary factors underlying global and local assembly of denitrifier communities

(2010) Christopher M Jones et al.   ISME Journal

nirK-Harboring Denitrifiers Are More Responsive to Denitrification- Inducing Conditions in Rice Paddy Soil Than nirS-Harboring Bacteria

(2010) Megumi Yoshida et al.   MICROBES AND ENVIRONMENTS

Autotrophic ammonia oxidation by soil thaumarchaea

(2010) L.-M. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Evolution and Future of Earth’s Nitrogen Cycle

(2010) Donald E. Canfield et al.   SCIENCE

The ecological role of bivalve shellfish aquaculture in the estuarine environment: A review with application to oyster and clam culture in West Coast (USA) estuaries

(2009) Brett R. Dumbauld et al.   AQUACULTURE

Investigation of microcystin removal from eutrophic surface water by aquatic vegetable bed

(2009) Hai-Liang Song et al.   ECOLOGICAL ENGINEERING

An integrated ecological floating-bed employing plant, freshwater clam and biofilm carrier for purification of eutrophic water

(2009) Xian-Ning Li et al.   ECOLOGICAL ENGINEERING

Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene

(2009) Pierre Offre et al.   FEMS MICROBIOLOGY ECOLOGY

Characterization of the light attenuation by periphyton in lakes of different trophic state

(2009) Uta Raeder et al.   LIMNOLOGICA

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

(2009) H. J. Di et al.   Nature Geoscience

ECOLOGY: Controlling Eutrophication: Nitrogen and Phosphorus

(2009) D. J. Conley et al.   SCIENCE

Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment

(2008) James I. Prosser et al.   ENVIRONMENTAL MICROBIOLOGY