nirS-type denitrifying bacterial communities in relation to soil physicochemical conditions and soil depths of two montane riparian meadows in North China

Soil organic carbon stock as an indicator for monitoring land and soil degradation in relation to United Nations' Sustainable Development Goals

(2019) Klaus Lorenz et al.   LAND DEGRADATION & DEVELOPMENT

The effects of varied soil properties induced by natural grassland succession on the process of soil detachment

(2018) Bing Wang et al.   CATENA

Microbial pathways for nitrogen loss in an upland soil

(2018) Guibing Zhu et al.   ENVIRONMENTAL MICROBIOLOGY

Interactive influence of livestock grazing and manipulated rainfall on soil properties in a humid tropical savanna

(2018) Daniel O. Okach et al.   JOURNAL OF SOILS AND SEDIMENTS

Rapid increases in soil pH solubilise organic matter, dramatically increase denitrification potential and strongly stimulate microorganisms from the Firmicutes phylum

(2018) Craig R. Anderson et al.   PeerJ

Riparian Meadow Response to Modern Conservation Grazing Management

(2017) Kristin M. Oles et al.   ENVIRONMENTAL MANAGEMENT

Influence of soil moisture on codenitrification fluxes from a urea-affected pasture soil

(2017) Timothy J. Clough et al.   Scientific Reports

Changes of soil microbial community under different degraded gradients of alpine meadow

(2016) Yaoming Li et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

The nitrogen cycle

(2016) Lisa Y. Stein et al.   CURRENT BIOLOGY

Carbon amendment and soil depth affect the distribution and abundance of denitrifiers in agricultural soils

(2016) M. Barrett et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

The influence of soil properties on the size and structure of bacterial and fungal communities along a paddy soil chronosequence

(2016) Chen Liu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Change from paddy rice to vegetable growing changes nitrogen-cycling microbial communities and their variation with depth in the soil

(2016) H. L. Qin et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Impacts of nitrogen and phosphorus additions on the abundance and community structure of ammonia oxidizers and denitrifying bacteria in Chinese fir plantations

(2016) Yuqian Tang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil chemical properties dynamics as affected by land use change in the humid forest zone of Cameroon

(2015) Bertin Takoutsing et al.   AGROFORESTRY SYSTEMS

Environmental evaluation of coexistence of denitrifying anaerobic methane-oxidizing archaea and bacteria in a paddy field

(2015) Jing Ding et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Plant community richness and microbial interactions structure bacterial communities in soil

(2015) Daniel C. Schlatter et al.   ECOLOGY

Diversity, Abundance, and Distribution of nirS-Harboring Denitrifiers in Intertidal Sediments of the Yangtze Estuary

(2015) Yanling Zheng et al.   MICROBIAL ECOLOGY

Change in deep soil microbial communities due to long-term fertilization

(2014) Chenhua Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

The influence of soil properties on denitrifying bacterial communities and denitrification potential in no-till production farms under contrasting management in the Argentinean Pampas

(2013) Silvina M. Rosa et al.   APPLIED SOIL ECOLOGY

Characterization of bacterial communities in soil and sediment of a created riverine wetland complex using high-throughput 16S rRNA amplicon sequencing

(2013) Teele Ligi et al.   ECOLOGICAL ENGINEERING

Effects of soil chemical characteristics and water regime on denitrification genes (nirS, nirK, and nosZ) abundances in a created riverine wetland complex

(2013) Teele Ligi et al.   ECOLOGICAL ENGINEERING

Loss in microbial diversity affects nitrogen cycling in soil

(2013) Laurent Philippot et al.   ISME Journal

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Changes in Fungal Community Composition in Response to Elevated Atmospheric CO2 and Nitrogen Fertilization Varies with Soil Horizon

(2013) Carolyn F. Weber et al.   Frontiers in Microbiology

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Quantifying the underestimation of soil denitrification potential as determined by the acetylene inhibition method

(2012) Shuping Qin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of soil management on structure and activity of denitrifying bacterial communities

(2011) Roberta Pastorelli et al.   APPLIED SOIL ECOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Soil Carbon and Nitrogen Storage in Upper Montane Riparian Meadows

(2011) Jay B. Norton et al.   ECOSYSTEMS

Soil characteristics more strongly influence soil bacterial communities than land-use type

(2011) Eiko E. Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Abundance, diversity and functional gene expression of denitrifier communities in adjacent riparian and agricultural zones

(2011) Catherine E. Dandie et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial processes controlling P availability in forest spodosols as affected by soil depth and soil properties

(2011) David L. Achat et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pyrosequencing and mid-infrared spectroscopy reveal distinct aggregate stratification of soil bacterial communities and organic matter composition

(2011) Marko Davinic et al.   SOIL BIOLOGY & BIOCHEMISTRY

Denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in a temperate re-connected floodplain

(2011) F. Sgouridis et al.   WATER RESEARCH

Differential responses of nirK- and nirS-carrying bacteria to denitrifying conditions in the anoxic rice field soil

(2011) Quan Yuan et al.   Environmental Microbiology Reports

Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2010) C. Will et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil environmental conditions rather than denitrifier abundance and diversity drive potential denitrification after changes in land uses

(2010) E. ATTARD et al.   GLOBAL CHANGE BIOLOGY

Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale

(2010) D Bru et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Archaeal ammonia oxidizers and nirS-type denitrifiers dominate sediment nitrifying and denitrifying populations in a subtropical macrotidal estuary

(2009) Guy C J Abell et al.   ISME Journal

Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment

(2009) Sara Hallin et al.   ISME Journal

Vegetation Affects the Relative Abundances of Dominant Soil Bacterial Taxa and Soil Respiration Rates in an Upland Grassland Soil

(2009) Bruce C. Thomson et al.   MICROBIAL ECOLOGY

Nitrogen isotopic composition of leached nitrate and soil organic matter as an indicator of denitrification in a sloping drained agricultural plot and adjacent uncultivated riparian buffer strips

(2009) Claire Billy et al.   SOIL BIOLOGY & BIOCHEMISTRY

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

(2009) James Robert White et al.   PLoS Computational Biology

Contribution of ambient ozone to Scots pine defoliation and reduced growth in the Central European forests: A Lithuanian case study

(2008) Algirdas Augustaitis et al.   ENVIRONMENTAL POLLUTION

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil organic matter in soil depth profiles: Distinct carbon preferences of microbial groups during carbon transformation

(2007) Christiane Kramer et al.   SOIL BIOLOGY & BIOCHEMISTRY