Sustainability of the rice-crayfish co-culture aquaculture model: microbiome profiles based on multi-kingdom analyses
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Title
Sustainability of the rice-crayfish co-culture aquaculture model: microbiome profiles based on multi-kingdom analyses
Authors
Keywords
-
Journal
Environmental Microbiome
Volume 17, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2022-05-22
DOI
10.1186/s40793-022-00422-4
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Note: Only part of the references are listed.- Coexistence patterns of soil methanogens are closely tied to methane generation and community assembly in rice paddies
- (2021) Dong Li et al. Microbiome
- Metagenomic Approaches to Analyze Antimicrobial Resistance: An Overview
- (2021) Vinicius A. C. de Abreu et al. Frontiers in Genetics
- Climate warming enhances microbial network complexity and stability
- (2021) Mengting Maggie Yuan et al. Nature Climate Change
- Patterns of Sediment Fungal Community Dependent on Farming Practices in Aquaculture Ponds
- (2021) Zhimin Zhang et al. Frontiers in Microbiology
- Elevated rates of horizontal gene transfer in the industrialized human microbiome
- (2021) Mathieu Groussin et al. CELL
- Two Marine Desulfotomaculum spp. of Different Origin are Capable of Utilizing Acetone and Higher Ketones
- (2021) Jasmin Frey et al. CURRENT MICROBIOLOGY
- A 20-year retrospective review of global aquaculture
- (2021) Rosamond L. Naylor et al. NATURE
- Examining horizontal gene transfer in microbial communities
- (2021) Ilana Lauren Brito NATURE REVIEWS MICROBIOLOGY
- Metagenomic analysis reveals the shared and distinct features of the soil resistome across tundra, temperate prairie, and tropical ecosystems
- (2021) Xun Qian et al. Microbiome
- Distinct bacterial communities in the environmental water, sediment and intestine between two crayfish-plant coculture ecosystems
- (2021) Dongdong Wei et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- High-Throughput Single-Cell Technology Reveals the Contribution of Horizontal Gene Transfer to Typical Antibiotic Resistance Gene Dissemination in Wastewater Treatment Plants
- (2021) Ziyan Wei et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Monitoring antibiotic resistance genes in wastewater treatment: Current strategies and future challenges
- (2021) Anh Q. Nguyen et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Protists modulate fungal community assembly in paddy soils across climatic zones at the continental scale
- (2021) Xing Huang et al. SOIL BIOLOGY & BIOCHEMISTRY
- Antibiotic-Resistant Bacteria in Aquaculture and Climate Change: A Challenge for Health in the Mediterranean Area
- (2021) Milva Pepi et al. International Journal of Environmental Research and Public Health
- Crayfish–rice integrated system of production: an agriculture success story in China. A review
- (2021) Yang Jiang et al. Agronomy for Sustainable Development
- Is rice-crayfish co-culture a better aquaculture model: From the perspective of antibiotic resistome profiles
- (2021) Kang Ning et al. ENVIRONMENTAL POLLUTION
- A Review on Occurrence and Spread of Antibiotic Resistance in Wastewaters and in Wastewater Treatment Plants: Mechanisms and Perspectives
- (2021) Cansu Uluseker et al. Frontiers in Microbiology
- Evaluation and Screening of Co-Culture Farming Models in Rice Field Based on Food Productivity
- (2020) Tao Jin et al. Sustainability
- Microbial co-occurrence network analysis of soils receiving short- and long-term applications of alkaline treated biosolids
- (2020) G.W. Price et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Rice-shrimp culture: a better intestinal microbiota, immune enzymatic activities, and muscle relish of crayfish (Procambarus clarkii) in Sichuan Province
- (2020) Qiao Liu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Rice-shrimp ecosystems in the Mekong Delta: Linking water quality, shrimp and their natural food sources
- (2020) Catherine Leigh et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Repetitive Elements Contribute to the Diversity and Evolution of Centromeres in the Fungal Genus Verticillium
- (2020) Michael F. Seidl et al. mBio
- Comparison of microbial communities and the antibiotic resistome between prawn mono- and poly-culture systems
- (2020) Zelong Zhao ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
- Global trends in antimicrobial use in aquaculture
- (2020) Daniel Schar et al. Scientific Reports
- Genomic, Morphological and Functional Characterization of Virulent Bacteriophage IME-JL8 Targeting Citrobacter freundii
- (2020) Kaixiang Jia et al. Frontiers in Microbiology
- MetaCHIP: community-level horizontal gene transfer identification through the combination of best-match and phylogenetic approaches
- (2019) Weizhi Song et al. Microbiome
- Insights into the intestinal microbiota of several aquatic organisms and association with the surrounding environment
- (2019) Fulin Sun et al. AQUACULTURE
- Antibiotic resistome profile based on metagenomics in raw surface drinking water source and the influence of environmental factor: A case study in Huaihe River Basin, China
- (2019) Ying Bai et al. ENVIRONMENTAL POLLUTION
- Agricultural Risk Factors Influence Microbial Ecology in Honghu Lake
- (2019) Maozhen Han et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Pesticides and antibiotics in permanent rice, alternating rice-shrimp and permanent shrimp systems of the coastal Mekong Delta, Vietnam
- (2019) G. Braun et al. ENVIRONMENT INTERNATIONAL
- Comprehensive Analysis Reveals the Evolution and Pathogenicity of Aeromonas, Viewed from Both Single Isolated Species and Microbial Communities
- (2019) Chaofang Zhong et al. mSystems
- Functional characteristics and influence factors of microbial community in sewage sludge composting with inorganic bulking agent
- (2018) Ke Wang et al. BIORESOURCE TECHNOLOGY
- Methanogenesis
- (2018) Zhe Lyu et al. CURRENT BIOLOGY
- Distribution of ARGs and MGEs among glacial soil, permafrost, and sediment using metagenomic analysis
- (2018) Shuhong Zhang et al. ENVIRONMENTAL POLLUTION
- Feed conversion efficiency in aquaculture: do we measure it correctly?
- (2018) Jillian P Fry et al. Environmental Research Letters
- Environmental microbiology: Marine biogeochemical cycles in a changing world
- (2018) Ashley York NATURE REVIEWS MICROBIOLOGY
- Bacteriological, Clinical and Virulence Aspects of Aeromonas-associated Diseases in Humans
- (2018) UTTARA DEY BHOWMICK et al. Polish Journal of Microbiology
- The feasibility of equilibria in large ecosystems: A primary but neglected concept in the complexity-stability debate
- (2018) Michaël Dougoud et al. PLoS Computational Biology
- DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data
- (2018) Gustavo Arango-Argoty et al. Microbiome
- MetaWRAP—a flexible pipeline for genome-resolved metagenomic data analysis
- (2018) Gherman V. Uritskiy et al. Microbiome
- Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities
- (2018) Yustian Rovi Alfiansah et al. Frontiers in Microbiology
- A Novel Inorganic Sulfur Compound Metabolizing Ferroplasma-Like Population Is Suggested to Mediate Extracellular Electron Transfer
- (2018) Gaofeng Ni et al. Frontiers in Microbiology
- Pathogenic potentials of Aeromonas species isolated from aquaculture and abattoir environments
- (2017) Isoken H. Igbinosa et al. MICROBIAL PATHOGENESIS
- Environmental Factors Shape Water Microbial Community Structure and Function in Shrimp Cultural Enclosure Ecosystems
- (2017) Dongwei Hou et al. Frontiers in Microbiology
- Microorganisms and ocean global change
- (2017) David A. Hutchins et al. Nature Microbiology
- Bacterial concentration and diversity in fresh tropical shrimps (Penaeus notialis) and the surrounding brackish waters and sediment
- (2016) D. Sylvain Dabadé et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
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- (2016) Naseer Sangwan et al. mSystems
- MetaPhlAn2 for enhanced metagenomic taxonomic profiling
- (2015) Duy Tin Truong et al. NATURE METHODS
- Structure and function of the global ocean microbiome
- (2015) S. Sunagawa et al. SCIENCE
- Determinants of community structure in the global plankton interactome
- (2015) G. Lima-Mendez et al. SCIENCE
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- When parasitic wasps hijacked viruses: genomic and functional evolution of polydnaviruses
- (2013) E. A. Herniou et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- One-year monitoring of meta-cleavage dioxygenase gene expression and microbial community dynamics reveals the relevance of subfamily I.2.C extradiol dioxygenases in hypoxic, BTEX-contaminated groundwater
- (2013) András Táncsics et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Biogeography of bacterial communities exposed to progressive long-term environmental change
- (2012) Ramiro Logares et al. ISME Journal
- Using species combinations in indicator value analyses
- (2012) Miquel De Cáceres et al. Methods in Ecology and Evolution
- Vinyl acetate degradation byBrevibacillus agriisolated from a slightly aerated methanogenic reactor
- (2010) I. Lara‐Mayorga et al. ENVIRONMENTAL TECHNOLOGY
- Methanogens: Methane Producers of the Rumen and Mitigation Strategies
- (2010) Sarah E. Hook et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- Viruses manipulate the marine environment
- (2009) Forest Rohwer et al. NATURE
- Temperature dependence, spatial scale, and tree species diversity in eastern Asia and North America
- (2009) Z. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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