The Influence of Coalescent Microbiotic Particles From Water and Soil on the Evolution and Spread of Antimicrobial Resistance

Community-wide changes reflecting bacterial interspecific interactions in multispecies biofilms

(2021) Faizan Ahmed Sadiq et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Removal of antibiotic resistance genes from swine wastewater by membrane filtration treatment

(2021) Chengyu Liang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Are microplastic particles a hotspot for the spread and the persistence of antibiotic resistance in aquatic systems?

(2021) María Belén Sathicq et al.   ENVIRONMENTAL POLLUTION

Sea foams are ephemeral hotspots for distinctive bacterial communities contrasting sea-surface microlayer and underlying surface water

(2021) Janina Rahlff et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial coaggregation in aquatic systems

(2021) Ana C. Afonso et al.   WATER RESEARCH

Efficacy of Cold Atmospheric Plasma Treatment on Chemical and Microbial Pollutants in Water

(2021) Amer S. El‐Kalliny et al.   ChemistrySelect

Laboratory Experimental Study on the Formation of Authigenic Carbonates Induced by Microbes in Marine Sediments

(2021) Zilin Wei et al.   Journal of Marine Science and Engineering

Bacteria autoaggregation: how and why bacteria stick together

(2021) El-shama Q. A. Nwoko et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Evolutionary Pathways and Trajectories in Antibiotic Resistance

(2021) F. Baquero et al.   CLINICAL MICROBIOLOGY REVIEWS

The aerobiome uncovered: Multi-marker metabarcoding reveals potential drivers of turn-over in the full microbial community in the air

(2021) G. Arjen de Groot et al.   ENVIRONMENT INTERNATIONAL

Distinct profile of bacterial community and antibiotic resistance genes on microplastics in Ganjiang River at the watershed level

(2021) Hua Hu et al.   ENVIRONMENTAL RESEARCH

Multi-stable bacterial communities exhibit extreme sensitivity to initial conditions

(2021) Erik S Wright et al.   FEMS MICROBIOLOGY ECOLOGY

Contribution of microplastic particles to the spread of resistances and pathogenic bacteria in treated wastewaters

(2021) Silvia Galafassi et al.   WATER RESEARCH

Comparing the effect of zinc oxide and titanium dioxide nanoparticles on the ability of moderately halophilic bacteria to treat wastewater

(2021) Vanessa Weber et al.   Scientific Reports

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

(2021) Silvia G. Acinas et al.   Communications Biology

Evidence for Long-Term Anthropogenic Pollution: The Hadal Trench as a Depository and Indicator for Dissemination of Antibiotic Resistance Genes

(2021) Huiying Yang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Estuarine salinity gradient governs sedimentary bacterial community but not antibiotic resistance gene profile

(2021) Jin Huang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Spatiotemporal dynamics of the resistome and virulome of riverine microbiomes disturbed by a mining mud tsunami

(2021) Maria Luíza Soares Suhadolnik et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Host Dependence of Zooplankton-Associated Microbes and Their Ecological Implications in Freshwater Lakes

(2021) Qianhong Wang et al.   Water

Nanotechnology for Targeted Detection and Removal of Bacteria: Opportunities and Challenges

(2021) Mohammad J. Hajipour et al.   Advanced Science

Biofilms: Hot spots of horizontal gene transfer (HGT) in aquatic environments, with a focus on a new HGT mechanism

(2020) Kimihiro Abe et al.   FEMS MICROBIOLOGY ECOLOGY

Characterization of key bacterial species in the Daphnia magna microbiota using shotgun metagenomics

(2020) Reilly O. Cooper et al.   Scientific Reports

A systematic pipeline for classifying bacterial operons reveals the evolutionary landscape of biofilm machineries

(2020) Cedoljub Bundalovic-Torma et al.   PLoS Computational Biology

Global ocean resistome revealed: Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples

(2020) Rafael R C Cuadrat et al.   GigaScience

The mechanism and application of bidirectional extracellular electron transport in the field of energy and environment

(2020) Qingqing Xie et al.   CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY

Antibiotic residues in final effluents of European wastewater treatment plants and their impact on the aquatic environment

(2020) Sara Rodriguez-Mozaz et al.   ENVIRONMENT INTERNATIONAL

Phylogenomic analysis reveals a two‐stage process of the evolutionary transition of Shewanella from the upper ocean to the hadal zone

(2020) Xixiang Tang et al.   ENVIRONMENTAL MICROBIOLOGY

Interactions between bacteria and fungi in macrophyte leaf litter decomposition

(2020) Biying Zhao et al.   ENVIRONMENTAL MICROBIOLOGY

Extracellular polymeric substances mediate the coaggregation of aquatic biofilm-forming bacteria

(2020) Niyati Hede et al.   HYDROBIOLOGIA

Impact of flooding on urban soils: Changes in antibiotic resistance and bacterial community after Hurricane Harvey

(2020) Abigail Pérez-Valdespino et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evidence of selective enrichment of bacterial assemblages and antibiotic resistant genes by microplastics in urban rivers

(2020) Jie Wang et al.   WATER RESEARCH

Broad-Spectrum Antimicrobial and Antibiofilm Activity of a Natural Clay Mineral from British Columbia, Canada

(2020) Shekooh Behroozian et al.   mBio

Characterization of MCU-Binding Proteins MCUR1 and CCDC90B — Representatives of a Protein Family Conserved in Prokaryotes and Eukaryotic Organelles

(2019) Jyoti Adlakha et al.   STRUCTURE

Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence

(2019) Katariina M. M. Pärnänen et al.   Science Advances

Algae−bacteria interactions that balance the planktonic microbiome

(2019) Emilio Cirri et al.   NEW PHYTOLOGIST

Fungi in aquatic ecosystems

(2019) Hans-Peter Grossart et al.   NATURE REVIEWS MICROBIOLOGY

Arctic marine fungi: biomass, functional genes, and putative ecological roles

(2019) B. T Hassett et al.   ISME Journal

Causes and biophysical consequences of cellulose production by Pseudomonas fluorescens SBW25 at the air-liquid interface

(2019) Maxime Ardré et al.   JOURNAL OF BACTERIOLOGY

Microbial diversity in a coastal environment with co-existing upwelling and mud-banks along the south west coast of India

(2019) A. Parvathi et al.   MOLECULAR BIOLOGY REPORTS

Rhizosphere size and shape: Temporal dynamics and spatial stationarity

(2019) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions

(2019) Natalia García-García et al.   ISME Journal

Alginate as a feature of osmotolerance differentiation among soil bacteria isolated from wild legumes growing in Portugal

(2019) Carina Sá et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle

(2019) Alfonso Santos-Lopez et al.   eLife

Defining and combating antibiotic resistance from One Health and Global Health perspectives

(2019) Sara Hernando-Amado et al.   Nature Microbiology

Unravelling interspecies interactions across heterogeneities in complex biofilm communities

(2019) Henriette L. Røder et al.   ENVIRONMENTAL MICROBIOLOGY

How bacteria recognise and respond to surface contact

(2019) Tom E P Kimkes et al.   FEMS MICROBIOLOGY REVIEWS

Decay of elevated antibiotic resistance genes in natural river sediments after sedimentation of wastewater particles

(2019) Philip C. Brown et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Marine aggregates in North Atlantic coast: Microbial characteristics and potential interactions with farmed Atlantic salmon (Salmo salar)

(2019) Isabelle Poirier et al.   MARINE ENVIRONMENTAL RESEARCH

Microbial regulation of natural antibiotic resistance: Understanding the protist-bacteria interactions for evolution of soil resistome

(2019) Bao-Anh Thi Nguyen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Distribution, Interaction and Functional Profiles of Epiphytic Bacterial Communities from the Rocky Intertidal Seaweeds, South Africa

(2019) Ramganesh Selvarajan et al.   Scientific Reports

Global Ramifications of Dust and Sandstorm Microbiota

(2018) Hayedeh Behzad et al.   Genome Biology and Evolution

Mechanism of co-aggregation in a protein mixture with small additives

(2018) Shogo Oki et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Antibiotic-Resistance Genes in Waste Water

(2018) Antti Karkman et al.   TRENDS IN MICROBIOLOGY

Structure and function of the global topsoil microbiome

(2018) Mohammad Bahram et al.   NATURE

Microbial Extracellular Polymeric Substances: Ecological Function and Impact on Soil Aggregation

(2018) Ohana Y. A. Costa et al.   Frontiers in Microbiology

Aquaculture, Exaptation, and the Origin of mcr-Positive Colistin Resistance

(2018) Felipe C. Cabello et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Impact of the particulate matter from wastewater discharge on the abundance of antibiotic resistance genes and facultative pathogenic bacteria in downstream river sediments

(2018) Philip C. Brown et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Metagenomic insights into zooplankton-associated bacterial communities

(2017) Daniele De Corte et al.   ENVIRONMENTAL MICROBIOLOGY

Cell-cell recognition and social networking in bacteria

(2017) Vera Troselj et al.   ENVIRONMENTAL MICROBIOLOGY

Responses of the Microalga Chlorophyta sp. to Bacterial Quorum Sensing Molecules (N-Acylhomoserine Lactones): Aromatic Protein-Induced Self-Aggregation

(2017) Dandan Zhou et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Volcanic ash supports a diverse bacterial community in a marine mesocosm

(2017) V. Witt et al.   Geobiology

Planetary health: protecting human health on a rapidly changing planet

(2017) Samuel S Myers   LANCET

Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

(2017) Xinglin Jiang et al.   Nature Communications

Microbial Extracellular Polymeric Substances (EPSs) in Ocean Systems

(2017) Alan W. Decho et al.   Frontiers in Microbiology

Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships

(2017) Justin R. Seymour et al.   Nature Microbiology

Bioaerosols in the Earth system: Climate, health, and ecosystem interactions

(2016) Janine Fröhlich-Nowoisky et al.   ATMOSPHERIC RESEARCH

Algae–bacteria interactions: Evolution, ecology and emerging applications

(2016) Rishiram Ramanan et al.   BIOTECHNOLOGY ADVANCES

Coexistence facilitates interspecific biofilm formation in complex microbial communities

(2016) Jonas S. Madsen et al.   ENVIRONMENTAL MICROBIOLOGY

Eukaryotic microbes, principally fungi and labyrinthulomycetes, dominate biomass on bathypelagic marine snow

(2016) Alexander B Bochdansky et al.   ISME Journal

Design principles for the analysis and construction of robustly homeostatic biological networks

(2016) Zhe F. Tang et al.   JOURNAL OF THEORETICAL BIOLOGY

Randomness in Sequence Evolution Increases over Time

(2016) Guangyu Wang et al.   PLoS One

Decay rates of faecal indicator bacteria from sewage and ovine faeces in brackish and freshwater microcosms with contrasting suspended particulate matter concentrations

(2016) Tracy L. Perkins et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz

(2016) Francisco J. R. C. Coelho et al.   Scientific Reports

Species Richness and Adaptation of Marine Fungi from Deep-Subseafloor Sediments

(2015) Vanessa Rédou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A domain dictionary of trimeric autotransporter adhesins

(2015) Jens Bassler et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Modeling multispecies biofilms including new bacterial species invasion

(2015) B. D’Acunto et al.   MATHEMATICAL BIOSCIENCES

Experimental Interactions Between Clay Minerals and Bacteria: A Review

(2015) Barbara MUELLER   PEDOSPHERE

Microbial hotspots and hot moments in soil: Concept & review

(2015) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mini-review: Microbial coaggregation: ubiquity and implications for biofilm development

(2014) S. Katharios-Lanwermeyer et al.   BIOFOULING

The extensive set of accessoryPseudomonas aeruginosagenomic components

(2014) Sarah Pohl et al.   FEMS MICROBIOLOGY LETTERS

Millimeter-Sized Marine Plastics: A New Pelagic Habitat for Microorganisms and Invertebrates

(2014) Julia Reisser et al.   PLoS One

Joint Evolution of Kin Recognition and Cooperation in Spatially Structured Rhizobium Populations

(2014) Peter C. Zee et al.   PLoS One

Interactions in multispecies biofilms: do they actually matter?

(2014) Mette Burmølle et al.   TRENDS IN MICROBIOLOGY

Simple design criteria and efficiency of hydrodynamic vortex separators

(2014) M. A. Gronowska-Szneler et al.   WATER SCIENCE AND TECHNOLOGY

Molecular Bacteria-Fungi Interactions: Effects on Environment, Food, and Medicine

(2013) Kirstin Scherlach et al.   Annual Review of Microbiology

Sticking together: building a biofilm the Bacillus subtilis way

(2013) Hera Vlamakis et al.   NATURE REVIEWS MICROBIOLOGY

Micrometer-scale physical structure and microbial composition of soil macroaggregates

(2013) Vanessa L. Bailey et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial secreted exopolysaccharides affect the hydrological behavior of induced biological soil crusts in desert sandy soils

(2013) Giovanni Colica et al.   SOIL BIOLOGY & BIOCHEMISTRY

Non-invasive characterization of electrochemically active microbial biofilms using confocal Raman microscopy

(2012) Bernardino Virdis et al.   Energy & Environmental Science

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Interactions between Diatoms and Bacteria

(2012) S. A. Amin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Primitive agriculture in a social amoeba

(2011) Debra A. Brock et al.   NATURE

Current understanding of multi‐species biofilms

(2011) Liang Yang et al.   International Journal of Oral Science

Antibiofilm Activity of the Marine Bacterium Pseudoalteromonas sp. Strain 3J6

(2010) A. Dheilly et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Networks of Gene Sharing among 329 Proteobacterial Genomes Reveal Differences in Lateral Gene Transfer Frequency at Different Phylogenetic Depths

(2010) T. Kloesges et al.   MOLECULAR BIOLOGY AND EVOLUTION

High Frequency of Horizontal Gene Transfer in the Oceans

(2010) L. D. McDaniel et al.   SCIENCE

Comparison of Bacterioneuston and Bacterioplankton Dynamics during a Phytoplankton Bloom in a Fjord Mesocosm

(2009) M. Cunliffe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Planktonic cell yield is linked to biofilm development

(2009) Elanna Bester et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Everything depends on everything else

(2009) J. Davies   CLINICAL MICROBIOLOGY AND INFECTION

Environmental stress and evolvability in microbial systems

(2009) F. Baquero   CLINICAL MICROBIOLOGY AND INFECTION

Evidence of Increasing Antibiotic Resistance Gene Abundances in Archived Soils since 1940

(2009) Charles W. Knapp et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bacterial Extracellular Polysaccharides Involved in Biofilm Formation

(2009) Barbara Vu et al.   MOLECULES

Antibiotics and antibiotic resistance in water environments

(2008) Fernando Baquero et al.   CURRENT OPINION IN BIOTECHNOLOGY

Coaggregation between and among human intestinal and oral bacteria

(2008) Ruth G. Ledder et al.   FEMS MICROBIOLOGY ECOLOGY

High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area

(2008) Anna Hervas et al.   FEMS MICROBIOLOGY ECOLOGY

Regulation of Gene Expression in a Mixed-Genus Community: Stabilized Arginine Biosynthesis in Streptococcus gordonii by Coaggregation with Actinomyces naeslundii

(2008) N. S. Jakubovics et al.   JOURNAL OF BACTERIOLOGY

A Molecular Study of Microbe Transfer between Distant Environments

(2008) Sean D. Hooper et al.   PLoS One

Antibiotics and Antibiotic Resistance Genes in Natural Environments

(2008) J. L. Martinez   SCIENCE

Effects of wastewater effluent organic materials on fouling in ultrafiltration

(2008) Hyun-Chul Kim et al.   WATER RESEARCH

The evolution of contact-dependent inhibition in non-growing populations of Escherichia coli

(2007) M. Lemonnier et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES