Development of Quantitative Real-Time PCR for Detecting Environmental DNA Derived from Marine Macrophytes and Its Application to a Field Survey in Hiroshima Bay, Japan

Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome

(2021) Shivani Rana et al.   GENOMICS

Diagnostics for SARS-CoV-2 infections

(2021) Bhavesh D. Kevadiya et al.   NATURE MATERIALS

Dissolved organic carbon from cultured kelp Saccharina japonica: production, bioavailability, and bacterial degradation rates

(2021) Y Gao et al.   Aquaculture Environment Interactions

Evaluation of the baseline carbon sequestration rates of Indo‐Pacific temperate and tropical seagrass meadow sediments

(2021) Toshihiro Miyajima et al.   ECOLOGICAL RESEARCH

The blue carbon wealth of nations

(2021) Christine Bertram et al.   Nature Climate Change

Quantitative assessment of multiple fish species around artificial reefs combining environmental DNA metabarcoding and acoustic survey

(2021) Masaaki Sato et al.   Scientific Reports

PCR inhibition in qPCR, dPCR and MPS—mechanisms and solutions

(2020) Maja Sidstedt et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

A multigene molecular phylogeny of Eisenia reveals evidence for a new species, Eisenia nipponica (Laminariales), from Japan

(2020) Hiroshi Kawai et al.   EUROPEAN JOURNAL OF PHYCOLOGY

The current state of DNA barcoding of macroalgae in the Mediterranean Sea: presently lacking but urgently required

(2020) Angela G. Bartolo et al.   BOTANICA MARINA

Redefining Pyropia (Bangiales, Rhodophyta): Four New Genera, Resurrection of Porphyrella and Description of Calidia pseudolobata sp. nov. From China 1

(2020) Li‐En Yang et al.   JOURNAL OF PHYCOLOGY

A DNA mini‐barcode for marine macrophytes

(2020) Alejandra Ortega et al.   Molecular Ecology Resources

Foliose Ulva species show considerable inter‐specific genetic diversity, low intra‐specific genetic variation, and the rare occurrence of inter‐specific hybrids in the wild

(2020) Antoine Fort et al.   JOURNAL OF PHYCOLOGY

Predicting benthic macroalgal abundance in shallow coastal lagoons from geomorphology and hydrologic flow patterns

(2020) Alice F. Besterman et al.   LIMNOLOGY AND OCEANOGRAPHY

Lateral carbon fluxes and CO2 evasion from a subtropical mangrove-seagrass-coral continuum

(2020) Anirban Akhand et al.   SCIENCE OF THE TOTAL ENVIRONMENT

qPCR and qRT-PCR analysis: Regulatory points to consider when conducting biodistribution and vector shedding studies

(2020) Haiyan Ma et al.   Molecular Therapy-Methods & Clinical Development

Species-level biodiversity assessment using marine environmental DNA metabarcoding requires protocol optimization and standardization

(2019) Gert-Jan Jeunen et al.   Ecology and Evolution

Green turtle diet is dominated by seagrass in the Western Indian Ocean except amongst gravid females

(2019) Holly J. Stokes et al.   MARINE BIOLOGY

Long-term decomposition captures key steps in microbial breakdown of seagrass litter

(2019) Stacey M. Trevathan-Tackett et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Sequestration of macroalgal carbon: the elephant in the Blue Carbon room

(2018) Dorte Krause-Jensen et al.   Biology Letters

Quantitative real-time polymerase chain reaction (PCR) and droplet digital PCR duplex assays for detecting Zostera marina DNA in coastal sediments

(2018) Masami Hamaguchi et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus )

(2018) Lynsey R. Harper et al.   Ecology and Evolution

Macroalgae bloom decay decreases the sediment organic carbon sequestration potential in tropical seagrass meadows of the South China Sea

(2018) Songlin Liu et al.   MARINE POLLUTION BULLETIN

Single-Copy Genes as Molecular Markers for Phylogenomic Studies in Seed Plants

(2017) Zhen Li et al.   Genome Biology and Evolution

Using eDNA to determine the source of organic carbon in seagrass meadows

(2017) Ruth Reef et al.   LIMNOLOGY AND OCEANOGRAPHY

Geophysical constraints for organic carbon sequestration capacity of Zostera marina seagrass meadows and surrounding habitats

(2017) Toshihiro Miyajima et al.   LIMNOLOGY AND OCEANOGRAPHY

Evaluation of TaqMan qPCR System Integrating Two Identically Labelled Hydrolysis Probes in Single Assay

(2017) Alexander Nagy et al.   Scientific Reports

Carbon dioxide mitigation potential of seaweed aquaculture beds (SABs)

(2016) Calvyn F. A. Sondak et al.   JOURNAL OF APPLIED PHYCOLOGY

Multiplex reverse transcription quantitative PCR detection of a single-stranded RNA virus HcRNAV infecting the bloom-forming dinoflagellateHeterocapsa circularisquama

(2016) Natsuko Nakayama et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Genetic diversity and biogeography of native and introduced populations ofUlva pertusa(Ulvales, Chlorophyta)

(2016) Takeaki Hanyuda et al.   PHYCOLOGICAL RESEARCH

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Ulva partita sp. nov., a Novel Enteromorpha-Like Ulva Species from Japanese Coastal Areas

(2015) Kensuke Ichihara et al.   CYTOLOGIA

Indirect paleo-seagrass indicators (IPSIs): A review

(2015) S. Reich et al.   EARTH-SCIENCE REVIEWS

Systematics of North Pacific sand lances of the genus Ammodytes based on molecular and morphological evidence, with the description of a new species from Japan

(2015) James W. Orr et al.   FISHERY BULLETIN

Geographic variability in organic carbon stock and accumulation rate in sediments of East and Southeast Asian seagrass meadows

(2015) Toshihiro Miyajima et al.   GLOBAL BIOGEOCHEMICAL CYCLES

A molecular investigation of the genusEcklonia(Phaeophyceae, Laminariales) with special focus on the Southern Hemisphere

(2015) Mark D. Rothman et al.   JOURNAL OF PHYCOLOGY

Saccharina genomes provide novel insight into kelp biology

(2015) Naihao Ye et al.   Nature Communications

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species

(2015) M. Miya et al.   Royal Society Open Science

Use of Droplet Digital PCR for Estimation of Fish Abundance and Biomass in Environmental DNA Surveys

(2015) Hideyuki Doi et al.   PLoS One

Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons

(2015) Magdalena Guardiola et al.   PLoS One

Phylogeographic pattern of Rhizophora (Rhizophoraceae) reveals the importance of both vicariance and long-distance oceanic dispersal to modern mangrove distribution

(2014) Eugenia YY Lo et al.   BMC EVOLUTIONARY BIOLOGY

REVIEW: The detection of aquatic animal species using environmental DNA - a review of eDNA as a survey tool in ecology

(2014) Helen C. Rees et al.   JOURNAL OF APPLIED ECOLOGY

Ancient and modern environmental DNA

(2014) Mikkel Winther Pedersen et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Guidelines for validation of qualitative real-time PCR methods

(2014) S. Broeders et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Mitochondrial DNA and morphological identification ofCrassostrea zhanjiangensissp. nov. (Bivalvia: Ostreidae): a new species in Zhanjiang, China

(2013) Xiangyun Wu et al.   AQUATIC LIVING RESOURCES

Chloroplast genome of one brown seaweed, Saccharina japonica (Laminariales, Phaeophyta): Its structural features and phylogenetic analyses with other photosynthetic plastids

(2013) Xiuliang Wang et al.   Marine Genomics

PCR inhibitors - occurrence, properties and removal

(2012) C. Schrader et al.   JOURNAL OF APPLIED MICROBIOLOGY

An index to assess the health and benefits of the global ocean

(2012) Benjamin S. Halpern et al.   NATURE

Development of a DNA Barcoding System for Seagrasses: Successful but Not Simple

(2012) Christina Lucas et al.   PLoS One

DNA-Based Faecal Dietary Analysis: A Comparison of qPCR and High Throughput Sequencing Approaches

(2011) Dáithí C. Murray et al.   PLoS One

New universal matK primers for DNA barcoding angiosperms

(2011) Jing YU et al.   Journal of Systematics and Evolution

Hybridization and polyploidy of an aquatic plant, Ruppia (Ruppiaceae), inferred from plastid and nuclear DNA phylogenies

(2010) Yu Ito et al.   AMERICAN JOURNAL OF BOTANY

The cellulose synthase superfamily in fully sequenced plants and algae

(2009) Yanbin Yin et al.   BMC PLANT BIOLOGY

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Mitochondrial DNA sequence variation of four Saccharina species (Laminariales, Phaeophyceae) growing in Japan

(2009) Norishige Yotsukura et al.   JOURNAL OF APPLIED PHYCOLOGY

Checklist for optimization and validation of real-time PCR assays

(2009) Marijke Raymaekers et al.   JOURNAL OF CLINICAL LABORATORY ANALYSIS