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Title
UPF1 promotes rapid degradation of m6A-containing RNAs
Authors
Keywords
N6-methyladenosine, m, A, YTHDF2, UPF1, PNRC2, nonsense-mediated mRNA decay, mRNA degradation, RNA modification
Journal
Cell Reports
Volume 39, Issue 8, Pages 110861
Publisher
Elsevier BV
Online
2022-05-24
DOI
10.1016/j.celrep.2022.110861
References
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- (2020) Yujin Lee et al. TRENDS IN GENETICS
- The emerging role of RNA modifications in the regulation of mRNA stability
- (2020) Sung Ho Boo et al. EXPERIMENTAL AND MOLECULAR MEDICINE
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- (2019) Yoon Ki Kim et al. RNA
- eIF4A3 Phosphorylation by CDKs Affects NMD during the Cell Cycle
- (2019) Incheol Ryu et al. Cell Reports
- Endoribonucleolytic Cleavage of m6A-Containing RNAs by RNase P/MRP Complex
- (2019) Ok Hyun Park et al. MOLECULAR CELL
- Where, When, and How: Context-Dependent Functions of RNA Methylation Writers, Readers, and Erasers
- (2019) Hailing Shi et al. MOLECULAR CELL
- RNA modifications regulating cell fate in cancer
- (2019) Sylvain Delaunay et al. NATURE CELL BIOLOGY
- Quality and quantity control of gene expression by nonsense-mediated mRNA decay
- (2019) Tatsuaki Kurosaki et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- N6-methyladenosine modifications: interactions with novel RNA-binding proteins and roles in signal transduction
- (2019) Jiaxin Chen et al. RNA Biology
- The Biogenesis and Precise Control of RNA m6A Methylation
- (2019) Huilin Huang et al. TRENDS IN GENETICS
- New insights into the interplay between the translation machinery and nonsense-mediated mRNA decay factors
- (2018) Etienne Raimondeau et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Dynamic transcriptomic m6A decoration: writers, erasers, readers and functions in RNA metabolism
- (2018) Ying Yang et al. CELL RESEARCH
- Nonsense-Mediated mRNA Decay Begins Where Translation Ends
- (2018) Evangelos D. Karousis et al. Cold Spring Harbor Perspectives in Biology
- UPF1 helicase promotes TSN-mediated miRNA decay
- (2017) Reyad A. Elbarbary et al. GENES & DEVELOPMENT
- The RNA Surveillance Factor UPF1 Represses Myogenesis via Its E3 Ubiquitin Ligase Activity
- (2017) Qing Feng et al. MOLECULAR CELL
- Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs
- (2017) Chan Zhou et al. Cell Reports
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- (2016) Ok Hyun Park et al. GENES & DEVELOPMENT
- A GC-rich sequence feature in the 3′ UTR directs UPF1-dependent mRNA decay in mammalian cells
- (2016) Naoto Imamachi et al. GENOME RESEARCH
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- (2016) Jeffrey S Mugridge et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Identification of Interactions in the NMD Complex Using Proximity-Dependent Biotinylation (BioID)
- (2016) Christoph Schweingruber et al. PLoS One
- Hyperphosphorylation amplifies UPF1 activity to resolve stalls in nonsense-mediated mRNA decay
- (2016) Sébastien Durand et al. Nature Communications
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- (2016) Hao Du et al. Nature Communications
- Structural basis of mRNA-cap recognition by Dcp1–Dcp2
- (2016) Jeffrey S Mugridge et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Glucocorticoid receptor interacts with PNRC2 in a ligand-dependent manner to recruit UPF1 for rapid mRNA degradation
- (2015) Hana Cho et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine
- (2014) Tingting Zhu et al. CELL RESEARCH
- Structure of the YTH domain of human YTHDF2 in complex with an m6A mononucleotide reveals an aromatic cage for m6A recognition
- (2014) Fudong Li et al. CELL RESEARCH
- A post-translational regulatory switch on UPF1 controls targeted mRNA degradation
- (2014) Tatsuaki Kurosaki et al. GENES & DEVELOPMENT
- Gene expression regulation mediated through reversible m6A RNA methylation
- (2014) Ye Fu et al. NATURE REVIEWS GENETICS
- The SMG5-SMG7 heterodimer directly recruits the CCR4-NOT deadenylase complex to mRNAs containing nonsense codons via interaction with POP2
- (2013) B. Loh et al. GENES & DEVELOPMENT
- N6-methyladenosine-dependent regulation of messenger RNA stability
- (2013) Xiao Wang et al. NATURE
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons
- (2012) Kate D. Meyer et al. CELL
- Staufen1-Mediated mRNA Decay Functions in Adipogenesis
- (2012) Hana Cho et al. MOLECULAR CELL
- Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
- (2012) Dan Dominissini et al. NATURE
- SMG5–PNRC2 is functionally dominant compared with SMG5–SMG7 in mammalian nonsense-mediated mRNA decay
- (2012) Hana Cho et al. NUCLEIC ACIDS RESEARCH
- Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability
- (2012) Hidenori Tani et al. RNA Biology
- Structural Basis of the PNRC2-Mediated Link between mRNA Surveillance and Decapping
- (2012) Tingfeng Lai et al. STRUCTURE
- Identification and removal of ribosomal RNA sequences from metatranscriptomes
- (2011) Robert Schmieder et al. BIOINFORMATICS
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- The Pioneer Round of Translation: Features and Functions
- (2010) Lynne E. Maquat et al. CELL
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- A new MIF4G domain-containing protein, CTIF, directs nuclear cap-binding protein CBP80/20-dependent translation
- (2009) K. M. Kim et al. GENES & DEVELOPMENT
- Human Proline-Rich Nuclear Receptor Coregulatory Protein 2 Mediates an Interaction between mRNA Surveillance Machinery and Decapping Complex
- (2009) Hana Cho et al. MOLECULAR CELL
- Upf1 Phosphorylation Triggers Translational Repression during Nonsense-Mediated mRNA Decay
- (2008) Olaf Isken et al. CELL
- SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs
- (2008) C. Gong et al. GENES & DEVELOPMENT
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