The CDC48 complex mediates ubiquitin-dependent degradation of intra-chloroplast proteins in plants

The chaperone‐like protein Cdc48 regulates ubiquitin‐proteasome system in plants

(2021) Claire Rosnoblet et al.   PLANT CELL AND ENVIRONMENT

Molecular Evolutionary Genetics Analysis (MEGA) for macOS

(2020) Glen Stecher et al.   MOLECULAR BIOLOGY AND EVOLUTION

Proximity labeling proteomics reveals critical regulators for inner nuclear membrane protein degradation in plants

(2020) Aobo Huang et al.   Nature Communications

Mitochondria-Associated Degradation Pathway (MAD) Function beyond the Outer Membrane

(2020) Pin-Chao Liao et al.   Cell Reports

Protein Quality Control in Plant Organelles: Current Progress and Future Perspectives

(2020) Jing-Liang Sun et al.   Molecular Plant

Ubiquitin-dependent chloroplast-associated protein degradation in plants

(2019) Qihua Ling et al.   SCIENCE

CDC48 regulates ascorbate peroxidase in tobacco

(2019) Hervé Bègue et al.   JOURNAL OF EXPERIMENTAL BOTANY

ATG8-Binding UIM Proteins Define a New Class of Autophagy Adaptors and Receptors

(2019) Richard S. Marshall et al.   CELL

Chalcone synthase is ubiquitinated and degraded via interactions with a RING-H2 protein in petals of Paeonia hybrid ‘He Xie’

(2019) Zhaoyu Gu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Unravelling hidden components of the chloroplast envelope proteome: opportunities and limits of better MS sensitivity

(2019) Imen Bouchnak et al.   MOLECULAR & CELLULAR PROTEOMICS

The chromatin‐remodelling factor PICKLE interacts with CONSTANS to promote flowering in Arabidopsis

(2019) Yanjun Jing et al.   PLANT CELL AND ENVIRONMENT

Chloroplast-Localized Protoporphyrinogen IX Oxidase1 Is Involved in the Mitotic Cell Cycle in Arabidopsis

(2019) Jialong Li et al.   PLANT AND CELL PHYSIOLOGY

The ubiquitin‐proteasome system in plant responses to environments

(2019) Fa‐Qing Xu et al.   PLANT CELL AND ENVIRONMENT

Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding

(2019) Edward C. Twomey et al.   SCIENCE

Interplay between REVEILLE1 and RGA‐LIKE2 regulates seed dormancy and germination in Arabidopsis

(2019) Liwen Yang et al.   NEW PHYTOLOGIST

Cellular quality control by the ubiquitin-proteasome system and autophagy

(2019) Christian Pohl et al.   SCIENCE

Chloroplast stress signals: regulation of cellular degradation and chloroplast turnover

(2019) Jesse D Woodson   CURRENT OPINION IN PLANT BIOLOGY

Proteome and Ubiquitome Changes during Rose Petal Senescence

(2019) Jingyun Lu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins

(2018) Sonya Neal et al.   MOLECULAR CELL

Ubiquitin-Dependent Degradation of Mitochondrial Proteins Regulates Energy Metabolism

(2018) Julie Lavie et al.   Cell Reports

FtsH Protease in the Thylakoid Membrane: Physiological Functions and the Regulation of Protease Activity

(2018) Yusuke Kato et al.   Frontiers in Plant Science

Essentials of Proteolytic Machineries in Chloroplasts

(2017) Kenji Nishimura et al.   Molecular Plant

Chloroplast: the Trojan horse in plant-virus interaction

(2017) Dhriti Bhattacharyya et al.   MOLECULAR PLANT PATHOLOGY

Entire Photodamaged Chloroplasts Are Transported to the Central Vacuole by Autophagy

(2017) Masanori Izumi et al.   PLANT CELL

A Proteomic Approach Suggests Unbalanced Proteasome Functioning Induced by the Growth-Promoting Bacterium Kosakonia radicincitans in Arabidopsis

(2017) Katja Witzel et al.   Frontiers in Plant Science

Comprehensive profiling of lysine ubiquitome reveals diverse functions of lysine ubiquitination in common wheat

(2017) Ning Zhang et al.   Scientific Reports

Autoubiquitination of the Hrd1 Ligase Triggers Protein Retrotranslocation in ERAD

(2016) Ryan D. Baldridge et al.   CELL

Strategic role of the ubiquitin-dependent segregase p97 (VCP or Cdc48) in DNA replication

(2016) Kristijan Ramadan et al.   CHROMOSOMA

Spreading the news: subcellular and organellar reactive oxygen species production and signalling

(2016) Lorin Mignolet-Spruyt et al.   JOURNAL OF EXPERIMENTAL BOTANY

Functional characterization of the chaperon-like protein Cdc48 in cryptogein-induced immune response in tobacco

(2016) Claire Rosnoblet et al.   PLANT CELL AND ENVIRONMENT

AtCDC48A is involved in the turnover of an NLR immune receptor

(2016) Charles Copeland et al.   PLANT JOURNAL

Organization, function and substrates of the essential Clp protease system in plastids

(2015) Kenji Nishimura et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Comprehensive Profiling of the Rice Ubiquitome Reveals the Significance of Lysine Ubiquitination in Young Leaves

(2015) Xin Xie et al.   JOURNAL OF PROTEOME RESEARCH

Natural alleles of a proteasome α2 subunit gene contribute to thermotolerance and adaptation of African rice

(2015) Xin-Min Li et al.   NATURE GENETICS

Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts

(2015) J. D. Woodson et al.   SCIENCE

Prokaryotic Ubiquitin-Like Protein Modification

(2014) Julie A. Maupin-Furlow   Annual Review of Microbiology

The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes

(2014) Zsuzsanna Mérai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tetrapyrrole biosynthetic enzyme protoporphyrinogen IX oxidase 1 is required for plastid RNA editing

(2014) Fan Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Roles of autophagy in chloroplast recycling

(2013) Hiroyuki Ishida et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Biogenesis and homeostasis of chloroplasts and other plastids

(2013) Paul Jarvis et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets inArabidopsis

(2013) Do-Young Kim et al.   PLANT CELL

The Arabidopsis F-Box Protein CORONATINE INSENSITIVE1 Is Stabilized by SCFCOI1 and Degraded via the 26S Proteasome Pathway

(2013) J. Yan et al.   PLANT CELL

Ethylene Response Factor 6 Is a Regulator of Reactive Oxygen Species Signaling in Arabidopsis

(2013) Nasser Sewelam et al.   PLoS One

Role of p97/VCP (Cdc48) in genome stability

(2013) Bruno Vaz et al.   Frontiers in Genetics

Mitochondrial quality control by the ubiquitin–proteasome system: Figure 1

(2012) Eric B. Taylor et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Dual Recruitment of Cdc48 (p97)-Ufd1-Npl4 Ubiquitin-selective Segregase by Small Ubiquitin-like Modifier Protein (SUMO) and Ubiquitin in SUMO-targeted Ubiquitin Ligase-mediated Genome Stability Functions

(2012) Minghua Nie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Refined Preparation and Use of Anti-diglycine Remnant (K-ε-GG) Antibody Enables Routine Quantification of 10,000s of Ubiquitination Sites in Single Proteomics Experiments

(2012) Namrata D. Udeshi et al.   MOLECULAR & CELLULAR PROTEOMICS

Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system

(2012) Hemmo Meyer et al.   NATURE CELL BIOLOGY

Chloroplast Biogenesis Is Regulated by Direct Action of the Ubiquitin-Proteasome System

(2012) Q. Ling et al.   SCIENCE

ROS and redox signalling in the response of plants to abiotic stress

(2011) NOBUHIRO SUZUKI et al.   PLANT CELL AND ENVIRONMENT

LTD is a protein required for sorting light-harvesting chlorophyll-binding proteins to the chloroplast SRP pathway

(2011) Min Ouyang et al.   Nature Communications

A Stress-Responsive System for Mitochondrial Protein Degradation

(2010) Jin-Mi Heo et al.   MOLECULAR CELL

Efficient protection and isolation of ubiquitylated proteins using tandem ubiquitin-binding entities

(2009) Roland Hjerpe et al.   EMBO REPORTS

The ubiquitylation machinery of the endoplasmic reticulum

(2009) Christian Hirsch et al.   NATURE

Heat Shock Protein Cognate 70-4 and an E3 Ubiquitin Ligase, CHIP, Mediate Plastid-Destined Precursor Degradation through the Ubiquitin-26S Proteasome System in Arabidopsis

(2009) S. Lee et al.   PLANT CELL

An efficient system to detect protein ubiquitination by agroinfiltration inNicotiana benthamiana

(2009) Lijing Liu et al.   PLANT JOURNAL

Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses

(2008) Yuanqing Jiang et al.   PLANT MOLECULAR BIOLOGY

In Planta Analysis of the Cell Cycle-Dependent Localization of AtCDC48A and Its Critical Roles in Cell Division, Expansion, and Differentiation

(2008) S. Park et al.   PLANT PHYSIOLOGY

Mobilization of Rubisco and Stroma-Localized Fluorescent Proteins of Chloroplasts to the Vacuole by an ATG Gene-Dependent Autophagic Process

(2008) H. Ishida et al.   PLANT PHYSIOLOGY