Dynamic changes in bacterial community structure are associated with distinct priming effect patterns

Temperature sensitivity of SOM decomposition is linked with a K‐selected microbial community

(2021) Hui Li et al.   GLOBAL CHANGE BIOLOGY

Microbial community assembly and metabolic function during wheat straw decomposition under different nitrogen fertilization treatments

(2020) Yangquanwei Zhong et al.   BIOLOGY AND FERTILITY OF SOILS

Identification of microbial strategies for labile substrate utilization at phylogenetic classification using a microcosm approach

(2020) Xinxin Wang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots

(2019) Samiran Banerjee et al.   ISME Journal

Competitive interaction with keystone taxa induced negative priming under biochar amendments

(2019) Lijun Chen et al.   Microbiome

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Effect of long-term fertilization on decomposition of crop residues and their incorporation into microbial communities of 6-year stored soils

(2019) Zengqiang Li et al.   BIOLOGY AND FERTILITY OF SOILS

Keystone taxa predict compositional change in microbial communities

(2018) Cristina M. Herren et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial mechanisms of carbon priming effects revealed during the interaction of crop residue and nutrient inputs in contrasting soils

(2018) Yunying Fang et al.   GLOBAL CHANGE BIOLOGY

Keystone taxa as drivers of microbiome structure and functioning

(2018) Samiran Banerjee et al.   NATURE REVIEWS MICROBIOLOGY

Soil bacterial community mediates the effect of plant material on methanogenic decomposition of soil organic matter

(2018) Quan Yuan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Characterization of microbial community response to cover crop residue decomposition

(2018) Clayton J. Nevins et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity patterns of the rhizosphere and bulk soil microbial communities along an altitudinal gradient in an alpine ecosystem of the eastern Tibetan Plateau

(2018) Yongxing Cui et al.   GEODERMA

Soil microbial diversity drives the priming effect along climate gradients: a case study in Madagascar

(2017) Kanto Razanamalala et al.   ISME Journal

The fate of soybean residue-carbon links to changes of bacterial community composition in Mollisols differing in soil organic carbon

(2017) Tengxiang Lian et al.   SOIL BIOLOGY & BIOCHEMISTRY

Disentangling Interactions in the Microbiome: A Network Perspective

(2017) Mehdi Layeghifard et al.   TRENDS IN MICROBIOLOGY

Priming effect of maize residue and urea N on soil organic matter changes with time

(2016) Qingyan Qiu et al.   APPLIED SOIL ECOLOGY

Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe

(2016) R.E. Creamer et al.   APPLIED SOIL ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Network analysis reveals functional redundancy and keystone taxa amongst bacterial and fungal communities during organic matter decomposition in an arable soil

(2016) Samiran Banerjee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Taxon-specific responses of soil microbial communities to different soil priming effects induced by addition of plant residues and their biochars

(2015) Peng Su et al.   JOURNAL OF SOILS AND SEDIMENTS

Tillage effects on soil aggregation, organic carbon fractions and grain yield in Eum-Orthic Anthrosol of a winter wheat-maize double-cropping system, Northwest China

(2015) Q. Ji et al.   SOIL USE AND MANAGEMENT

Network analysis reveals that bacteria and fungi form modules that correlate independently with soil parameters

(2014) Alexandre B. de Menezes et al.   ENVIRONMENTAL MICROBIOLOGY

Linking soil bacterial biodiversity and soil carbon stability

(2014) Rebecca L Mau et al.   ISME Journal

Effect of nutrients availability and long-term tillage on priming effect and soil C mineralization

(2014) Bassem Dimassi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial interactions affect sources of priming induced by cellulose

(2014) Evgenia Blagodatskaya et al.   SOIL BIOLOGY & BIOCHEMISTRY

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Assessing the Relative Effects of Geographic Location and Soil Type on Microbial Communities Associated with Straw Decomposition

(2013) Bo Sun et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial Pretreatment of Corn Stovers by Solid-State Cultivation of Phanerochaete chrysosporium for Biogas Production

(2013) Shan Liu et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Stimulation of Different Functional Groups of Bacteria by Various Plant Residues as a Driver of Soil Priming Effect

(2013) Noémie Pascault et al.   ECOSYSTEMS

Taxonomic relatedness shapes bacterial assembly in activated sludge of globally distributed wastewater treatment plants

(2013) Feng Ju et al.   ENVIRONMENTAL MICROBIOLOGY

Soil C and N availability determine the priming effect: microbial N mining and stoichiometric decomposition theories

(2013) Ruirui Chen et al.   GLOBAL CHANGE BIOLOGY

Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes

(2013) Trista J Vick-Majors et al.   ISME Journal

Priming of soil organic matter mineralisation is intrinsically insensitive to temperature

(2013) Claire Ghee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial modulators of soil carbon storage: integrating genomic and metabolic knowledge for global prediction

(2013) Pankaj Trivedi et al.   TRENDS IN MICROBIOLOGY

Phylogenetic Distribution of Potential Cellulases in Bacteria

(2012) Renaud Berlemont et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

The keystone-pathogen hypothesis

(2012) George Hajishengallis et al.   NATURE REVIEWS MICROBIOLOGY

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil

(2011) Eric Paterson et al.   APPLIED SOIL ECOLOGY

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

(2011) Charles K Lee et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Short term soil priming effects and the mineralisation of biochar following its incorporation to soils of different pH

(2011) Y. Luo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Water-use efficiency and physiological responses of maize under partial root-zone irrigation

(2010) Fusheng Li et al.   AGRICULTURAL WATER MANAGEMENT

Is there a linear relationship between priming effect intensity and the amount of organic matter input?

(2010) Bertrand Guenet et al.   APPLIED SOIL ECOLOGY

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Priming effects: Interactions between living and dead organic matter

(2010) Yakov Kuzyakov   SOIL BIOLOGY & BIOCHEMISTRY

Measuring soil microbial biomass using an automated procedure

(2010) Rainer Georg Joergensen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Fungi mediate long term sequestration of carbon and nitrogen in soil through their priming effect

(2010) S. Fontaine et al.   SOIL BIOLOGY & BIOCHEMISTRY

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Succession of Bacterial Populations during Plant Residue Decomposition in Rice Field Soil

(2009) J. Rui et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting effects of glucose, living roots and maize straw on microbial growth kinetics and substrate availability in soil

(2009) E. V. Blagodatskaya et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Residue chemistry and microbial community structure during decomposition of eucalypt, wheat and vetch residues

(2009) Karen Baumann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mechanisms of real and apparent priming effects and their dependence on soil microbial biomass and community structure: critical review

(2008) Е. Blagodatskaya et al.   BIOLOGY AND FERTILITY OF SOILS

Temperature sensitivity of soil organic matter decomposition in southern and northern areas of the boreal forest zone

(2008) Pekka Vanhala et al.   SOIL BIOLOGY & BIOCHEMISTRY

Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant- and soil C-sources

(2008) Eric Paterson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Impact of wheat straw decomposition on successional patterns of soil microbial community structure

(2008) Fabiola Bastian et al.   SOIL BIOLOGY & BIOCHEMISTRY

Carbon sequestration

(2007) R. Lal   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Mineralization of native soil organic matter is not regulated by the size, activity or composition of the soil microbial biomass—a new perspective

(2007) S.J. Kemmitt et al.   SOIL BIOLOGY & BIOCHEMISTRY