Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition

Impact of Probiotic B. infantis EVC001 Feeding in Premature Infants on the Gut Microbiome, Nosocomially Acquired Antibiotic Resistance, and Enteric Inflammation

(2021) Marielle Nguyen et al.   Frontiers in Pediatrics

A Microbiota-Directed Food Intervention for Undernourished Children

(2021) Robert Y. Chen et al.   NEW ENGLAND JOURNAL OF MEDICINE

Bifidobacteria-mediated immune system imprinting early in life

(2021) Bethany M. Henrick et al.   CELL

Comparative Genome Analysis of Bifidobacterium longum subsp. infantis Strains Reveals Variation in Human Milk Oligosaccharide Utilization Genes among Commercial Probiotics

(2020) Rebbeca M. Duar et al.   Nutrients

N-Glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase

(2019) Rosa Lorizolla Cordeiro et al.   JOURNAL OF MOLECULAR BIOLOGY

Micronutrient Requirements and Sharing Capabilities of the Human Gut Microbiome

(2019) Dmitry A. Rodionov et al.   Frontiers in Microbiology

Effects of microbiota-directed foods in gnotobiotic animals and undernourished children

(2019) Jeanette L. Gehrig et al.   SCIENCE

A sparse covarying unit that describes healthy and impaired human gut microbiota development

(2019) Arjun S. Raman et al.   SCIENCE

Evolutionary adaptation in fucosyllactose uptake systems supports bifidobacteria-infant symbiosis

(2019) Mikiyasu Sakanaka et al.   Science Advances

Bioremediation of a Common Product of Food Processing by a Human Gut Bacterium

(2019) Ashley R. Wolf et al.   Cell Host & Microbe

IFN-β is a macrophage-derived effector cytokine facilitating the resolution of bacterial inflammation

(2019) Senthil Kumaran Satyanarayanan et al.   Nature Communications

Metabolism of the predominant human milk oligosaccharide fucosyllactose by an infant gut commensal

(2019) Kieran James et al.   Scientific Reports

Comparative Genomics Reveals the Regulatory Complexity of Bifidobacterial Arabinose and Arabino-Oligosaccharide Utilization

(2018) Aleksandr A. Arzamasov et al.   Frontiers in Microbiology

Human milk oligosaccharides and infant gut bifidobacteria: Molecular strategies for their utilization

(2017) Pamela Thomson et al.   FOOD MICROBIOLOGY

Efficacy of World Health Organization guideline in facility-based reduction of mortality in severely malnourished children from low and middle income countries: A systematic review and meta-analysis

(2017) Muttaquina Hossain et al.   JOURNAL OF PAEDIATRICS AND CHILD HEALTH

Systematic review of the concentrations of oligosaccharides in human milk

(2017) Stephan Thurl et al.   NUTRITION REVIEWS

The effects of micronutrient deficiencies on bacterial species from the human gut microbiota

(2017) Matthew C. Hibberd et al.   Science Translational Medicine

Bangladesh Environmental Enteric Dysfunction (BEED) study: protocol for a community-based intervention study to validate non-invasive biomarkers of environmental enteric dysfunction

(2017) Mustafa Mahfuz et al.   BMJ Open

Differentiation of Bifidobacterium longum subspecies longum and infantis by quantitative PCR using functional gene targets

(2017) Blair Lawley et al.   PeerJ

Impaired Barrier Function and Autoantibody Generation in Malnutrition Enteropathy in Zambia

(2017) Beatrice Amadi et al.   EBioMedicine

PaperBLAST: Text Mining Papers for Information about Homologs

(2017) Morgan N. Price et al.   mSystems

Oligosaccharides Released from Milk Glycoproteins Are Selective Growth Substrates for Infant-Associated Bifidobacteria

(2016) Sercan Karav et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Chronic disease outcomes after severe acute malnutrition in Malawian children (ChroSAM): a cohort study

(2016) Natasha Lelijveld et al.   Lancet Global Health

Adjusting microbiome profiles for differences in microbial load by spike-in bacteria

(2016) Frank Stämmler et al.   Microbiome

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

The Transporter Classification Database (TCDB): recent advances

(2015) Milton H. Saier et al.   NUCLEIC ACIDS RESEARCH

Persistent gut microbiota immaturity in malnourished Bangladeshi children

(2014) Sathish Subramanian et al.   NATURE

Bifidobacterium longum subsp. infantis in experimental necrotizing enterocolitis: alterations in inflammation, innate immune response and the microbiota

(2014) Mark A. Underwood et al.   PEDIATRIC RESEARCH

Bifidobacterium longum subspecies infantis: champion colonizer of the infant gut

(2014) Mark A. Underwood et al.   PEDIATRIC RESEARCH

Stool Microbiota and Vaccine Responses of Infants

(2014) M. N. Huda et al.   PEDIATRICS

A refined palate: Bacterial consumption of host glycans in the gut

(2013) A. Marcobal et al.   GLYCOBIOLOGY

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome

(2013) Nathan P. McNulty et al.   PLOS BIOLOGY

Exploiting sparseness in de novo genome assembly

(2012) Chengxi Ye et al.   BMC BIOINFORMATICS

Global Efforts to Address Severe Acute Malnutrition

(2012) Ricardo Uauy et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Comparison of the Human and Bovine Milk N-Glycome via High-Performance Microfluidic Chip Liquid Chromatography and Tandem Mass Spectrometry

(2012) Charles C. Nwosu et al.   JOURNAL OF PROTEOME RESEARCH

Comprehensive Profiles of Human Milk Oligosaccharides Yield Highly Sensitive and Specific Markers for Determining Secretor Status in Lactating Mothers

(2012) Sarah M. Totten et al.   JOURNAL OF PROTEOME RESEARCH

Endo-β-N-acetylglucosaminidases from Infant Gut-associated Bifidobacteria Release ComplexN-glycans from Human Milk Glycoproteins

(2012) Daniel Garrido et al.   MOLECULAR & CELLULAR PROTEOMICS

A Molecular Basis for Bifidobacterial Enrichment in the Infant Gastrointestinal Tract

(2012) Daniel Garrido et al.   Advances in Nutrition

Oligosaccharide Binding Proteins from Bifidobacterium longum subsp. infantis Reveal a Preference for Host Glycans

(2011) Daniel Garrido et al.   PLoS One

Broad Conservation of Milk Utilization Genes in Bifidobacterium longum subsp. infantis as Revealed by Comparative Genomic Hybridization

(2010) R. G. LoCascio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Variation of human milk oligosaccharides in relation to milk groups and lactational periods

(2010) Stephan Thurl et al.   BRITISH JOURNAL OF NUTRITION

An exo-α-sialidase from bifidobacteria involved in the degradation of sialyloligosaccharides in human milk and intestinal glycoconjugates

(2010) Masashi Kiyohara et al.   GLYCOBIOLOGY

Cooperation of β-galactosidase and β-N-acetylhexosaminidase from bifidobacteria in assimilation of human milk oligosaccharides with type 2 structure

(2010) Mika Miwa et al.   GLYCOBIOLOGY

RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach

(2010) P. S. Novichkov et al.   NUCLEIC ACIDS RESEARCH

Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition

(2010) Andrew Adey et al.   GENOME BIOLOGY

Bifidobacterium bifidum Lacto-N-Biosidase, a Critical Enzyme for the Degradation of Human Milk Oligosaccharides with a Type 1 Structure

(2008) J. Wada et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome

(2008) D. A. Sela et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA