Ammonia-oxidizing bacteria rather than ammonia-oxidizing archaea dominate nitrification in a nitrogen-fertilized calcareous soil

Flow hydraulic characteristics and dynamic erodibility of saline-sodic soil slopes for coastal areas under simulated rainfall conditions

(2020) Dongdong Liu et al.   Archives of Agronomy and Soil Science

Nitrosospira cluster 3-like bacterial ammonia oxidizers and Nitrospira-like nitrite oxidizers dominate nitrification activity in acidic terrace paddy soils

(2019) Qian Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chronic Nitrogen Fertilization Modulates Competitive Interactions Among Microbial Ammonia Oxidizers in a Loess Soil

(2019) Xingchen DONG et al.   PEDOSPHERE

Long-term optimization of crop yield while concurrently improving soil quality

(2019) Junxiao Pan et al.   LAND DEGRADATION & DEVELOPMENT

Long‐term fertilization regimes change soil nitrification potential by impacting active autotrophic ammonia oxidizers and nitrite oxidizers as assessed by DNA stable isotope probing

(2019) Yali Kong et al.   ENVIRONMENTAL MICROBIOLOGY

Substituting ecological intensification of agriculture for conventional agricultural practices increased yield and decreased nitrogen losses in North China

(2019) Sami Ullah et al.   APPLIED SOIL ECOLOGY

Tillage, not fertilization, dominantly influences ammonia-oxidizing archaea diversity in long-term, continuous maize

(2019) S. Liu et al.   APPLIED SOIL ECOLOGY

Nitrous oxide production by ammonia oxidizers: Physiological diversity, niche differentiation and potential mitigation strategies

(2019) James I. Prosser et al.   GLOBAL CHANGE BIOLOGY

Ammonia‐Oxidizing Bacteria and Archaea: Response to Simulated Climate Warming and Nitrogen Supplementation

(2019) Guogang Zhang et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Crop yield gap and stability in organic and conventional farming systems

(2018) M. Schrama et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Nitrification in agricultural soils: impact, actors and mitigation

(2018) Fabian Beeckman et al.   CURRENT OPINION IN BIOTECHNOLOGY

Community and functional shifts in ammonia oxidizers across terrestrial and marine (soil/sediment) boundaries in two coastal Bay ecosystems

(2018) Li-Mei Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Ammonia oxidizers and nitrite-oxidizing bacteria respond differently to long-term manure application in four paddy soils of south of China

(2018) Haiyang Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Vertical distribution of ammonia-oxidizing microorganisms across a soil profile of the Chinese Loess Plateau and their responses to nitrogen inputs

(2018) Jinjin Tao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Are Nitrogen Fertilizers Deleterious to Soil Health?

(2018) Bijay- Singh   Agronomy-Basel

Overdose fertilization induced ammonia-oxidizing archaea producing nitrous oxide in intensive vegetable fields

(2018) Pengpeng Duan et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Accumulation, partitioning, and bioavailability of micronutrients in summer maize as affected by phosphorus supply

(2017) Wei Zhang et al.   EUROPEAN JOURNAL OF AGRONOMY

Response of ammonia-oxidizing archaea and bacteria in calcareous soil to mineral and organic fertilizer application and their relative contribution to nitrification

(2017) Rui Tao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Distinct drivers of activity, abundance, diversity and composition of ammonia-oxidizers: evidence from a long-term field experiment

(2017) Junjie Guo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Time-dependent shifts in populations and activity of bacterial and archaeal ammonia oxidizers in response to liming in acidic soils

(2017) Miao-Miao Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen cycling and environmental impacts in upland agricultural soils in North China: A review

(2017) Xiao-tang JU et al.   Journal of Integrative Agriculture

Linkage between N2O emission and functional gene abundance in an intensively managed calcareous fluvo-aquic soil

(2017) Liuqing Yang et al.   Scientific Reports

Nitrate leaching in a winter wheat-summer maize rotation on a calcareous soil as affected by nitrogen and straw management

(2017) Tao Huang et al.   Scientific Reports

The effect of biochar loading rates on soil fertility, soil biomass, potential nitrification, and soil community metabolic profiles in three different soils

(2016) Ibrahim S. Abujabhah et al.   JOURNAL OF SOILS AND SEDIMENTS

Nitrogen fertilization directly affects soil bacterial diversity and indirectly affects bacterial community composition

(2016) Jun Zeng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen fertilization induced changes in ammonia oxidation are attributable mostly to bacteria rather than archaea in greenhouse-based high N input vegetable soil

(2016) Wenhui Zhong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Meta-analysis reveals ammonia-oxidizing bacteria respond more strongly to nitrogen addition than ammonia-oxidizing archaea

(2016) Chelsea J. Carey et al.   SOIL BIOLOGY & BIOCHEMISTRY

Response of Soil Properties and Microbial Communities to Agriculture: Implications for Primary Productivity and Soil Health Indicators

(2016) Pankaj Trivedi et al.   Frontiers in Plant Science

The effects of cultivar and nitrogen management on wheat yield and nitrogen use efficiency in the North China Plain

(2015) Dianjun Lu et al.   FIELD CROPS RESEARCH

Interaction between plant density and nitrogen management strategy in improving maize grain yield and nitrogen use efficiency on the North China Plain

(2015) P. YAN et al.   JOURNAL OF AGRICULTURAL SCIENCE

Complete nitrification by a single microorganism

(2015) Maartje A. H. J. van Kessel et al.   NATURE

Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

Soil pH and biome are both key determinants of soil archaeal community structure

(2015) Binu M. Tripathi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Interaction between plant density and nitrogen management strategy in improving maize grain yield and nitrogen use efficiency on the North China Plain

(2015) P. YAN et al.   JOURNAL OF AGRICULTURAL SCIENCE

Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota

(2014) M. Stieglmeier et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils

(2014) Barbara Stempfhuber et al.   MICROBIAL ECOLOGY

Long-term effects of mineral fertilizers on soil microorganisms – A review

(2014) Daniel Geisseler et al.   SOIL BIOLOGY & BIOCHEMISTRY

Responses of ammonia-oxidizing bacteria and archaea to nitrogen fertilization and precipitation increment in a typical temperate steppe in Inner Mongolia

(2013) Yongliang Chen et al.   APPLIED SOIL ECOLOGY

Nitrification rates in Arctic soils are associated with functionally distinct populations of ammonia-oxidizing archaea

(2013) Ricardo J Eloy Alves et al.   ISME Journal

A paradigm shift towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI)

(2012) G. V. Subbarao et al.   ANNALS OF BOTANY

The genome of the ammonia-oxidizingCandidatusNitrososphaera gargensis: insights into metabolic versatility and environmental adaptations

(2012) Anja Spang et al.   ENVIRONMENTAL MICROBIOLOGY

Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials

(2012) Anne E Taylor et al.   ISME Journal

Different roles of rhizosphere effect and long-term fertilization in the activity and community structure of ammonia oxidizers in a calcareous fluvo-aquic soil

(2012) Chao Ai et al.   SOIL BIOLOGY & BIOCHEMISTRY

Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation

(2012) James I. Prosser et al.   TRENDS IN MICROBIOLOGY

Temporal and spatial distributions of ammonia-oxidizing archaea and bacteria and their ratio as an indicator of oligotrophic conditions in natural wetlands

(2012) Atreyee Sims et al.   WATER RESEARCH

A review of ammonia-oxidizing bacteria and archaea in Chinese soils

(2012) Ju-Pei Shen et al.   Frontiers in Microbiology

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms

(2011) Daniel T Verhamme et al.   ISME Journal

Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil

(2011) L. E. Lehtovirta-Morley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integrated soil-crop system management for food security

(2011) X.-P. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-Term Field Fertilization Significantly Alters Community Structure of Ammonia-Oxidizing Bacteria rather than Archaea in a Paddy Soil

(2011) Yucheng Wu et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests

(2010) Daniela F. Cusack et al.   ECOLOGY

Archaea rather than bacteria control nitrification in two agricultural acidic soils

(2010) Cécile Gubry-Rangin et al.   FEMS MICROBIOLOGY ECOLOGY

Evaluation of Different Soil Carbon Determination Methods

(2009) A. Chatterjee et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

(2009) H. J. Di et al.   Nature Geoscience

Reducing environmental risk by improving N management in intensive Chinese agricultural systems

(2009) X.-T. Ju et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transformation of the Nitrogen Cycle: Recent Trends, Questions, and Potential Solutions

(2008) J. N. Galloway et al.   SCIENCE

On-farm evaluation of an in-season nitrogen management strategy based on soil Nmin test

(2007) Zhenling Cui et al.   FIELD CROPS RESEARCH