Ammonia‐Oxidizing Bacteria and Archaea: Response to Simulated Climate Warming and Nitrogen Supplementation

Archaea are the predominant and responsive ammonia oxidizing prokaryotes in a red paddy soil receiving green manures

(2018) Song-juan Gao et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Long-term effects of grazing, liming and nutrient fertilization on the nitrifying community of grassland soils

(2018) Gary Egan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Response of Nitrifier and Denitrifier Abundance and Microbial Community Structure to Experimental Warming in an Agricultural Ecosystem

(2018) Tatoba R. Waghmode et al.   Frontiers in Microbiology

Ammonia-Oxidizing Archaea Show More Distinct Biogeographic Distribution Patterns than Ammonia-Oxidizing Bacteria across the Black Soil Zone of Northeast China

(2018) Junjie Liu et al.   Frontiers in Microbiology

Responses of soil microbial community to nitrogen fertilizer and precipitation regimes in a semi-arid steppe

(2017) Yi-Fei Sun et al.   JOURNAL OF SOILS AND SEDIMENTS

Ammonium availability and temperature control contributions of ammonia oxidizing bacteria and archaea to nitrification in an agricultural soil

(2017) Yang Ouyang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Contrasting effects of nitrogen forms and soil pH on ammonia oxidizing microorganisms and their responses to long-term nitrogen fertilization in a typical steppe ecosystem

(2017) Jiaoyan Ying et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ammonia-oxidizing bacteria rather than archaea respond to short-term urea amendment in an alpine grassland

(2017) Xingjia Xiang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing

(2017) Luisa W. Hugerth et al.   Frontiers in Microbiology

Warmer and drier conditions alter the nitrifier and denitrifier communities and reduce N 2 O emissions in fertilized vegetable soils

(2016) Xiaoya Xu et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Hydrogen peroxide detoxification is a key mechanism for growth of ammonia-oxidizing archaea

(2016) Jong-Geol Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Substrate availability drives spatial patterns in richness of ammonia-oxidizing bacteria and archaea in temperate forest soils

(2016) J.S. Norman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of climate warming and elevated CO 2 on autotrophic nitrification and nitrifiers in dryland ecosystems

(2016) Hang-Wei Hu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Legacy effects of soil moisture on microbial community structure and N 2 O emissions

(2016) Samiran Banerjee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ammonia-oxidizing bacteria are more responsive than archaea to nitrogen source in an agricultural soil

(2016) Yang Ouyang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil

(2016) Marlen C. Rice et al.   Standards in Genomic Sciences

Ammonia manipulates the ammonia-oxidizing archaea and bacteria in the coastal sediment-water microcosms

(2015) Yan Zhang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

pH regulates ammonia-oxidizing bacteria and archaea in paddy soils in Southern China

(2015) Hu Li et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High pH-enhanced soil nitrification was associated with ammonia-oxidizing bacteria rather than archaea in acidic soils

(2015) Jing Che et al.   APPLIED SOIL ECOLOGY

Responses of plant community coverage to simulated warming and nitrogen addition in a desert steppe in Northern China

(2015) Zhen Wang et al.   ECOLOGICAL RESEARCH

Influence of temperature and moisture on the relative contributions of heterotrophic and autotrophic nitrification to gross nitrification in an acid cropping soil

(2015) Rui Liu et al.   JOURNAL OF SOILS AND SEDIMENTS

Effects of 44 years of chronic nitrogen fertilization on the soil nitrifying community of permanent grassland

(2015) Xue Zhou et al.   SOIL BIOLOGY & BIOCHEMISTRY

Archaeal Ammonia Oxidizers Dominate in Numbers, but Bacteria Drive Gross Nitrification in N-amended Grassland Soil

(2015) Anna E. Sterngren et al.   Frontiers in Microbiology

The large-scale distribution of ammonia oxidizers in paddy soils is driven by soil pH, geographic distance, and climatic factors

(2015) Hang-Wei Hu et al.   Frontiers in Microbiology

Latitudinal Distribution of Ammonia-Oxidizing Bacteria and Archaea in the Agricultural Soils of Eastern China

(2014) Hongchen Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

pH-dominated niche segregation of ammonia-oxidising microorganisms in Chinese agricultural soils

(2014) Hu Baolan et al.   FEMS MICROBIOLOGY ECOLOGY

pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils

(2014) Barbara Stempfhuber et al.   MICROBIAL ECOLOGY

Parsing ecological signal from noise in next generation amplicon sequencing

(2014) Nhu H. Nguyen et al.   NEW PHYTOLOGIST

Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation

(2014) M. Konneke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-term effects of mineral fertilizers on soil microorganisms – A review

(2014) Daniel Geisseler et al.   SOIL BIOLOGY & BIOCHEMISTRY

Use of Aliphaticn-Alkynes To Discriminate Soil Nitrification Activities of Ammonia-Oxidizing Thaumarchaea and Bacteria

(2013) Anne E. Taylor et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Responses of ammonia-oxidizing bacteria and archaea to nitrogen fertilization and precipitation increment in a typical temperate steppe in Inner Mongolia

(2013) Yongliang Chen et al.   APPLIED SOIL ECOLOGY

Influence of nitrogen fertilization on soil ammonia oxidizer and denitrifier abundance, microbial biomass, and enzyme activities in an alpine meadow

(2013) Xiao-Fang Tian et al.   BIOLOGY AND FERTILITY OF SOILS

pH-dependent distribution of soil ammonia oxidizers across a large geographical scale as revealed by high-throughput pyrosequencing

(2013) Hang-Wei Hu et al.   JOURNAL OF SOILS AND SEDIMENTS

Enhanced nitrogen deposition over China

(2013) Xuejun Liu et al.   NATURE

Global Ecological Pattern of Ammonia-Oxidizing Archaea

(2013) Huiluo Cao et al.   PLoS One

Responses of bacterial and archaeal ammonia oxidisers of an acidic luvisols soil to different nitrogen fertilization rates after 9 years

(2012) Yong-gang Xu et al.   BIOLOGY AND FERTILITY OF SOILS

Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials

(2012) Anne E Taylor et al.   ISME Journal

Abundance and community structure of ammonia oxidizing bacteria and archaea in a Sweden boreal forest soil under 19-year fertilization and 12-year warming

(2012) Xien Long et al.   JOURNAL OF SOILS AND SEDIMENTS

Current insights into the autotrophic thaumarchaeal ammonia oxidation in acidic soils

(2012) Ji-Zheng He et al.   SOIL BIOLOGY & BIOCHEMISTRY

Different roles of rhizosphere effect and long-term fertilization in the activity and community structure of ammonia oxidizers in a calcareous fluvo-aquic soil

(2012) Chao Ai et al.   SOIL BIOLOGY & BIOCHEMISTRY

A review of ammonia-oxidizing bacteria and archaea in Chinese soils

(2012) Ju-Pei Shen et al.   Frontiers in Microbiology

Enrichment and Characterization of an Autotrophic Ammonia-Oxidizing Archaeon of Mesophilic Crenarchaeal Group I.1a from an Agricultural Soil

(2011) Man-Young Jung et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

(2011) Michael Pester et al.   ENVIRONMENTAL MICROBIOLOGY

Spotlight on the Thaumarchaeota

(2011) C Brochier-Armanet et al.   ISME Journal

Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils

(2011) Li-Mei Zhang et al.   ISME Journal

Autotrophic growth of nitrifying community in an agricultural soil

(2011) Weiwei Xia et al.   ISME Journal

Nitrogen loading levels affect abundance and composition of soil ammonia oxidizing prokaryotes in semiarid temperate grassland

(2011) Xin-Yi Shen et al.   JOURNAL OF SOILS AND SEDIMENTS

Ammonia oxidation coupled to CO2 fixation by archaea and bacteria in an agricultural soil

(2011) J. Pratscher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

(2011) M. Tourna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Niche specialization of terrestrial archaeal ammonia oxidizers

(2011) C. Gubry-Rangin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence for Different Contributions of Archaea and Bacteria to the Ammonia-Oxidizing Potential of Diverse Oregon Soils

(2010) A. E. Taylor et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

(2010) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

Nitrifiers and denitrifiers respond rapidly to changed moisture and increasing temperature in a pristine forest soil

(2010) Ute Szukics et al.   FEMS MICROBIOLOGY ECOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Climate warming and biomass accumulation of terrestrial plants: a meta-analysis

(2010) Delu Lin et al.   NEW PHYTOLOGIST

Autotrophic ammonia oxidation by soil thaumarchaea

(2010) L.-M. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

(2010) C. B. Walker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Do climate warming and plant species richness affect potential nitrification, basal respiration and ammonia-oxidizing bacteria in experimental grasslands?

(2010) S. Malchair et al.   SOIL BIOLOGY & BIOCHEMISTRY

Abundance of Ammonia-Oxidizing Archaea and Bacteria along an Estuarine Salinity Gradient in Relation to Potential Nitrification Rates

(2009) A. E. Bernhard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Non-Additive Effects of Water and Nitrogen Addition on Ecosystem Carbon Exchange in a Temperate Steppe

(2009) Shuli Niu et al.   ECOSYSTEMS

Bacteriarather thanArchaeadominate microbial ammonia oxidation in an agricultural soil

(2009) Zhongjun Jia et al.   ENVIRONMENTAL MICROBIOLOGY

The Biogeography of Ammonia-Oxidizing Bacterial Communities in Soil

(2009) Noah Fierer et al.   MICROBIAL ECOLOGY

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

(2009) H. J. Di et al.   Nature Geoscience

Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment

(2008) J. M. Norton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria

(2008) Graeme W. Nicol et al.   ENVIRONMENTAL MICROBIOLOGY

Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam

(2008) Ju-pei Shen et al.   ENVIRONMENTAL MICROBIOLOGY

A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring

(2008) R. Hatzenpichler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA