Isolation and characterization of vB_XciM_LucasX, a new jumbo phage that infects Xanthomonas citri and Xanthomonas fuscans

Characterization of four virulent Klebsiella pneumoniae bacteriophages, and evaluation of their potential use in complex phage preparation

(2021) Fedor Zurabov et al.   Virology Journal

Standard Bacteriophage Purification Procedures Cause Loss in Numbers and Activity

(2021) Amanda Carroll-Portillo et al.   Viruses-Basel

Bacteriophages as a Potential 360-Degree Pathogen Control Strategy

(2021) Maria D’Accolti et al.   Microorganisms

Novel Virulent Bacteriophages Infecting Mediterranean Isolates of the Plant Pest Xylella fastidiosa and Xanthomonas albilineans

(2021) Fernando Clavijo-Coppens et al.   Viruses-Basel

Isolation and Characterization of the Novel Phages vB_VpS_BA3 and vB_VpS_CA8 for Lysing Vibrio parahaemolyticus

(2020) Meiyan Yang et al.   Frontiers in Microbiology

3D structure of three jumbo phage heads

(2020) Emmanuelle Neumann et al.   JOURNAL OF GENERAL VIROLOGY

XerD-dependent integration of a novel filamentous phage Cf2 into the Xanthomonas citri genome

(2020) Ting-Yu Yeh   VIROLOGY

Isolation and Characterization of Salmonella Jumbo-Phage pSal-SNUABM-04

(2020) Jun Kwon et al.   Viruses-Basel

PHANOTATE: a novel approach to gene identification in phage genomes

(2019) Katelyn McNair et al.   BIOINFORMATICS

Bacteriophage Production Models: An Overview

(2019) Rodrigo García et al.   Frontiers in Microbiology

Mechanisms of copper stress alleviation in Citrus trees after metal uptake by leaves or roots

(2018) Franz Walter Rieger Hippler et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes

(2018) Genki Yoshikawa et al.   Scientific Reports

Isolation, characterization and in vivo efficacy of Escherichia phage myPSH1131

(2018) Prasanth Manohar et al.   PLoS One

Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage KΦ1, Its Survival and Potential in Control of Pepper Bacterial Spot

(2018) Katarina Gašić et al.   Frontiers in Microbiology

Bacteriophage production processes

(2018) Katja Jurač et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High Throughput Manufacturing of Bacteriophages Using Continuous Stirred Tank Bioreactors Connected in Series to Ensure Optimum Host Bacteria Physiology for Phage Production

(2018) Francesco Mancuso et al.   Viruses-Basel

Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD)

(2017) Anja Narr et al.   Frontiers in Microbiology

Bacteriophages and Bacterial Plant Diseases

(2017) Colin Buttimer et al.   Frontiers in Microbiology

Dynamic integration and excision of filamentous phage XacF1 in Xanthomonas citri pv. citri , the causative agent of citrus canker disease

(2017) Abdelmonim A. Ahmad et al.   FEBS Open Bio

Developing a bacteriophage cocktail for biocontrol of potato bacterial wilt

(2017) Cuihua Wei et al.   VIROLOGICA SINICA

Characterization of Novel Bacteriophages for Biocontrol of Bacterial Blight in Leek Caused by Pseudomonas syringae pv. porri

(2016) Sofie Rombouts et al.   Frontiers in Microbiology

Isolation ofRalstonia solanacearum-infecting bacteriophages from tomato fields in Chiang Mai, Thailand, and their experimental use as biocontrol agents

(2015) A. Bhunchoth et al.   JOURNAL OF APPLIED MICROBIOLOGY

Genomic, Proteomic and Morphological Characterization of Two Novel Broad Host Lytic Bacteriophages ΦPD10.3 and ΦPD23.1 Infecting Pectinolytic Pectobacterium spp. and Dickeya spp.

(2015) Robert Czajkowski et al.   PLoS One

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

(2015) Thomas Brettin et al.   Scientific Reports

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Isolation and partial characterization of bacteriophages infectingPseudomonas syringaepv.actinidiae, causal agent of kiwifruit bacterial canker

(2014) Gustavo Di Lallo et al.   JOURNAL OF BASIC MICROBIOLOGY

Characterization of Bacteriophages Cp1 and Cp2, the Strain-Typing Agents for Xanthomonas axonopodis pv. citri

(2013) Abdelmonim Ali Ahmad et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Gene transfer agents: phage-like elements of genetic exchange

(2012) Andrew S. Lang et al.   NATURE REVIEWS MICROBIOLOGY

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Bacteria causing important diseases of citrus utilise distinct modes of pathogenesis to attack a common host

(2010) Adrián Alberto Vojnov et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii

(2010) Leandro M Moreira et al.   BMC GENOMICS

Two-stage, self-cycling process for the production of bacteriophages

(2010) Dominic Sauvageau et al.   Microbial Cell Factories

Position paper: The creation of a rational scheme for the nomenclature of viruses ofBacteriaandArchaea

(2009) Andrew M. Kropinski et al.   ENVIRONMENTAL MICROBIOLOGY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION