WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidalSalmonella
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidalSalmonella
Authors
Keywords
-
Journal
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
Volume 71, Issue 12, Pages 3400-3408
Publisher
Oxford University Press (OUP)
Online
2016-09-02
DOI
10.1093/jac/dkw318
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Identification ofSalmonellafor public health surveillance using whole genome sequencing
- (2016) Philip M. Ashton et al. PeerJ
- Two Novel Salmonella Genomic Island 1 Variants in Proteus mirabilis Isolates from Swine Farms in China
- (2015) Chang-Wei Lei et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- IncA/C Plasmid CarryingblaNDM-1,blaCMY-16, andfosA3in a Salmonella enterica Serovar Corvallis Strain Isolated from a Migratory Wild Bird in Germany
- (2015) L. Villa et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Bandage: interactive visualization ofde novogenome assemblies: Fig. 1.
- (2015) Ryan R. Wick et al. BIOINFORMATICS
- Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
- (2015) Kate S Baker et al. LANCET INFECTIOUS DISEASES
- In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
- (2014) Alessandra Carattoli et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing
- (2014) N. C. Gordon et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Rapid Identification of Major Escherichia coli Sequence Types Causing Urinary Tract and Bloodstream Infections
- (2014) M. Doumith et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from Whole Genome Sequences
- (2014) Val F. Lanza et al. PLoS Genetics
- A retrospective study of secondary bacteraemia in hospitalised adults with community acquired non-typhoidal Salmonella gastroenteritis
- (2013) Christopher M Parry et al. BMC INFECTIOUS DISEASES
- Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data
- (2013) N. Stoesser et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Resistance to third-generation cephalosporins in human non-typhoidal Salmonella enterica isolates from England and Wales, 2010–12
- (2013) Liam Burke et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Highly drug-resistant Salmonella enterica serotype Kentucky ST198-X1: a microbiological study
- (2013) Simon Le Hello et al. LANCET INFECTIOUS DISEASES
- Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Azithromycin and Ciprofloxacin Resistance in Salmonella Bloodstream Infections in Cambodian Adults
- (2012) Erika R. Vlieghe et al. PLoS Neglected Tropical Diseases
- Routine Use of Microbial Whole Genome Sequencing in Diagnostic and Public Health Microbiology
- (2012) Claudio U. Köser et al. PLoS Pathogens
- Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica
- (2012) Mark Achtman et al. PLoS Pathogens
- Antimicrobial Susceptibility to Azithromycin among Salmonella enterica Isolates from the United States
- (2011) Maria Sjölund-Karlsson et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Easyfig: a genome comparison visualizer
- (2011) M. J. Sullivan et al. BIOINFORMATICS
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- First Report ofSalmonella entericaSerotype Paratyphi A Azithromycin Resistance Leading to Treatment Failure
- (2010) Aoife Molloy et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Enteric fever in a UK regional infectious diseases unit: A 10 year retrospective review
- (2009) Tristan W. Clark et al. JOURNAL OF INFECTION
- Antimicrobial resistance in typhoidal and nontyphoidal salmonellae
- (2008) Christopher M Parry et al. CURRENT OPINION IN INFECTIOUS DISEASES
- Antimicrobial Drug Resistance in Human Nontyphoidal Salmonella Isolates in Europe 2000–2004: A Report from the Enter-net International Surveillance Network
- (2008) Sally Meakins et al. Microbial Drug Resistance
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now