A preference for link operator functions can drive Boolean biological networks towards critical dynamics

Boolean function metrics can assist modelers to check and choose logical rules

(2022) John Zobolas et al.   JOURNAL OF THEORETICAL BIOLOGY

Criticality Distinguishes the Ensemble of Biological Regulatory Networks

(2018) Bryan C. Daniels et al.   PHYSICAL REVIEW LETTERS

Determining Relative Dynamic Stability of Cell States Using Boolean Network Model

(2018) Jae Il Joo et al.   Scientific Reports

Relative stability of network states in Boolean network models of gene regulation in development

(2016) Joseph Xu Zhou et al.   BIOSYSTEMS

Dynamical regimes in non-ergodic random Boolean networks

(2016) Marco Villani et al.   Natural Computing

Dynamical regimes in non-ergodic random Boolean networks

(2016) Marco Villani et al.   Natural Computing

Boolean networks with veto functions

(2014) Haleh Ebadi et al.   PHYSICAL REVIEW E

Network function shapes network structure: the case of the Arabidopsis flower organ specification genetic network

(2013) Adrien Henry et al.   Molecular BioSystems

The Cell Collective: Toward an open and collaborative approach to systems biology

(2012) Tomáš Helikar et al.   BMC Systems Biology

Are Biological Systems Poised at Criticality?

(2011) Thierry Mora et al.   JOURNAL OF STATISTICAL PHYSICS

Synchronous versus asynchronous modeling of gene regulatory networks

(2008) A. Garg et al.   BIOINFORMATICS

Maximum Number of Fixed Points in Regulatory Boolean Networks

(2008) Julio Aracena   BULLETIN OF MATHEMATICAL BIOLOGY

Gene expression dynamics in the macrophage exhibit criticality

(2008) M. Nykter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA