Evolutionary history of the Australasian Scirtinae (Scirtidae; Coleoptera) inferred from ultraconserved elements

A new genus, Perplexacara, and new generic placements of species of Australian marsh beetles (Coleoptera: Scirtidae) based on morphology and molecular genetic data

(2021) C.H.S. WATTS et al.   ZOOTAXA

Integrative phylogenomics reveals a Permian origin of Adephaga beetles

(2021) Stephen M. Baca et al.   SYSTEMATIC ENTOMOLOGY

Three new genera of large marsh beetles (Coleoptera: Scirtidae) from Valdivian temperate rain forests of southern South America

(2021) RAFAŁ RUTA   ZOOTAXA

Multiple lineages of hyper‐diverse Zopheridae beetles survived the New Zealand Oligocene Drowning

(2020) Thomas R. Buckley et al.   JOURNAL OF BIOGEOGRAPHY

MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics

(2020) Rémi Allio et al.   Molecular Ecology Resources

Genomic Characterization and Curation of UCEs Improves Species Tree Reconstruction

(2020) Matthew H Van Dam et al.   SYSTEMATIC BIOLOGY

New genera, species and combinations in the Pseudomicrocara Armstrong group (Coleoptera: Scirtidae) based on morphology supported by mitochondrial and nuclear gene sequence data

(2020) C.H.S. WATTS et al.   ZOOTAXA

Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data

(2019) Li-Gen Wang et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution and genomic basis of beetle diversity

(2019) Duane D. McKenna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Post K-Pg diversification of the mammalian order Eulipotyphla as suggested by phylogenomic analyses of ultra-conserved elements

(2019) Jun J. Sato et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenomic analysis of the beetle suborder Adephaga with comparison of tailored and generalized ultraconserved element probe performance

(2019) Grey T. Gustafson et al.   SYSTEMATIC ENTOMOLOGY

Estimating Improved Partitioning Schemes for Ultraconserved Elements

(2018) Victor A Tagliacollo et al.   MOLECULAR BIOLOGY AND EVOLUTION

So many genes, so little time: A practical approach to divergence-time estimation in the genomic era

(2018) Stephen A. Smith et al.   PLoS One

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

(2018) Andrew Rambaut et al.   SYSTEMATIC BIOLOGY

Meatopida gen. nov., a new genus to accommodate two species originally described in Atopida White, 1846 (Coleoptera: Scirtoidea: Scirtidae)

(2018) AGATA KIAŁKA et al.   ZOOTAXA

Evolutionary history of Coleoptera revealed by extensive sampling of genes and species

(2018) Shao-Qian Zhang et al.   Nature Communications

Extensive mitochondrial heteroplasmy in the neotropical ants of the Ectatomma ruidum complex (Formicidae: Ectatomminae)

(2018) Rubi N. Meza-Lázaro et al.   Mitochondrial DNA Part A

Ultraconserved elements show utility in phylogenetic inference of Adephaga (Coleoptera) and suggest paraphyly of ‘Hydradephaga’

(2017) STEPHEN M. BACA et al.   SYSTEMATIC ENTOMOLOGY

An illustrated catalogue of the New Zealand marsh beetles (Coleoptera: Scirtidae)

(2017) AGATA KIAŁKA et al.   ZOOTAXA

Review of Australian Scirtes Illiger, Ora Clark and Exochomoscirtes Pic Coleoptera: Scirtidae) including descriptions of new species, new groups and a multi-gene molecular phylogeny of Australian and non-Australian species

(2017) CHRIS H.S. WATTS et al.   ZOOTAXA

Ultraconserved elements (UCEs) resolve the phylogeny of Australasian smurf-weevils

(2017) Matthew H. Van Dam et al.   PLoS One

Revision of AustralianPrionocyphonRedtenbacher (Scirtidae: Coleoptera)

(2017) C.H.S. Watts   TRANSACTIONS OF THE ROYAL SOCIETY OF SOUTH AUSTRALIA

Revision of Australian Scirtidae of the Genera Chameloscyphon GEN. NOV., Daploeuros GEN. NOV., Dasyscyphon GEN. NOV., Eurycyphon GEN. NOV., Macrodascillus Carter, Petrocyphon Gen. NOV. and Spaniosdascillus Gen. NOV. (Coleoptera)

(2017) C.H.S. Watts   TRANSACTIONS OF THE ROYAL SOCIETY OF SOUTH AUSTRALIA

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

(2016) Robert Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Australian Marsh Beetles (Coleoptera: Scirtidae). 9. The relations of Australasian Ypsiloncyphon species to their Asian congeners, additions, mainly to Petrocyphon and Prionocyphon, and a key to Australian genera of Scirtinae

(2016) PETER ZWICK   ZOOTAXA

Capturing protein-coding genes across highly divergent species

(2016) Chenhong Li et al.   BIOTECHNIQUES

PHYLUCE is a software package for the analysis of conserved genomic loci

(2015) Brant C. Faircloth   BIOINFORMATICS

The beetle tree of life reveals that Coleoptera survived end-Permian mass extinction to diversify during the Cretaceous terrestrial revolution

(2015) DUANE D. MCKENNA et al.   SYSTEMATIC ENTOMOLOGY

Australian Marsh Beetles (Coleoptera: Scirtidae). 7. Genus Nothocyphon, new genus

(2015) PETER ZWICK   ZOOTAXA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Selecting optimal partitioning schemes for phylogenomic datasets

(2014) Robert Lanfear et al.   BMC EVOLUTIONARY BIOLOGY

Phylogenetic relationships of Australian Scirtidae (Coleoptera) based on mitochondrial and nuclear sequences

(2014) Steven J. B. Cooper et al.   INVERTEBRATE SYSTEMATICS

ExaBayes: Massively Parallel Bayesian Tree Inference for the Whole-Genome Era

(2014) Andre J. Aberer et al.   MOLECULAR BIOLOGY AND EVOLUTION

Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera

(2014) Brant C. Faircloth et al.   Molecular Ecology Resources

The Larvae of Some Australian Scirtidae (Coleoptera) with A Key to Known Genera

(2014) C.H.S. Watts   TRANSACTIONS OF THE ROYAL SOCIETY OF SOUTH AUSTRALIA

Australian Marsh Beetles (Coleoptera: Scirtidae). 6. Genera Calvarium Pic, Papuacyphon Zwick, and Ypsiloncyphon Klausnitzer

(2014) PETER ZWICK   ZOOTAXA

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Phylogeny of Birds Based on Over 1,500 Loci Collected by Target Enrichment and High-Throughput Sequencing

(2013) John E. McCormack et al.   PLoS One

Australian Marsh Beetles (Coleoptera: Scirtidae) 4. Two new genera, Austrocyphon and Tasmanocyphon

(2013) PETER ZWICK   ZOOTAXA

Review of the Argentinean species of Pseudomicrocara Armstrong   (Coleoptera: Scirtidae)

(2013) MARÍA LAURA LIBONATTI et al.   ZOOTAXA

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs

(2012) N. G. Crawford et al.   Biology Letters

Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales

(2012) Brant C. Faircloth et al.   SYSTEMATIC BIOLOGY

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

(2011) J. E. McCormack et al.   GENOME RESEARCH

Hit or miss in phylogeographic analyses: the case of the cryptic NUMTs

(2011) CORALIE BERTHEAU et al.   Molecular Ecology Resources

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries

(2011) Sheila Fisher et al.   GENOME BIOLOGY

'Moa's Ark' or 'Goodbye Gondwana': is the origin of New Zealand's terrestrial invertebrate fauna ancient, recent or both?

(2010) Gonzalo Giribet et al.   INVERTEBRATE SYSTEMATICS

Effects of data incompleteness on the relative performance of parsimony and Bayesian approaches in a supermatrix phylogenetic reconstruction of Mustelidae and Procyonidae (Carnivora)

(2009) Mieczyslaw Wolsan et al.   CLADISTICS