Comparative transcriptome analysis reveals distinct responsive biological processes in radish genotypes contrasting for Plasmodiophora brassicae interaction

Refining the life cycle of Plasmodiophora brassicae

(2020) Lijiang Liu et al.   PHYTOPATHOLOGY

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Comparative transcriptome analysis of cabbage (Brassica oleracea var. capitata) infected by Plasmodiophora brassicae reveals drastic defense response at secondary infection stage

(2019) Yu Ning et al.   PLANT AND SOIL

Construction of a high-density genetic linkage map and identification of quantitative trait loci associated with clubroot resistance in radish (Raphanus sativus L.)

(2019) Caixia Gan et al.   MOLECULAR BREEDING

Transcriptome Arofile of Brassica rapa L. Reveals the Involvement of Jasmonic Acid, Ethylene, and Brassinosteroid Signaling Pathways in Clubroot Resistance

(2019) Pengyu Fu et al.   Agronomy-Basel

Transcriptome analysis of response to Plasmodiophora brassicae infection in the Arabidopsis shoot and root

(2018) Solmaz Irani et al.   BMC GENOMICS

GOATOOLS: A Python library for Gene Ontology analyses

(2018) D. V. Klopfenstein et al.   Scientific Reports

A downy mildew effector evades recognition by polymorphism of expression and subcellular localization

(2018) Shuta Asai et al.   Nature Communications

Root RNA-seq analysis reveals a distinct transcriptome landscape between clubroot-susceptible and clubroot-resistant Chinese cabbage lines after Plasmodiophora brassicae infection

(2017) Hao Jia et al.   PLANT AND SOIL

Cytological and morphological analysis of hybrids between Brassicoraphanus, and Brassica napus for introgression of clubroot resistant trait into Brassica napus L

(2017) Zongxiang Zhan et al.   PLoS One

Transcriptome Analysis of Arabidopsis thaliana in Response to Plasmodiophora brassicae during Early Infection

(2017) Ying Zhao et al.   Frontiers in Microbiology

Identification of Optimal Reference Genes for Expression Analysis in Radish (Raphanus sativus L.) and Its Relatives Based on Expression Stability

(2017) Mengmeng Duan et al.   Frontiers in Plant Science

Structurally distinctArabidopsis thalianaNLR immune receptors recognize tandem WY domains of an oomycete effector

(2016) Sandra Goritschnig et al.   NEW PHYTOLOGIST

Comparative Transcriptome Analysis between Broccoli (Brassica oleracea var. italica) and Wild Cabbage (Brassica macrocarpa Guss.) in Response to Plasmodiophora brassicae during Different Infection Stages

(2016) Xiaoli Zhang et al.   Frontiers in Plant Science

Function of ABA in Stomatal Defense against Biotic and Drought Stresses

(2015) Chae Lim et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Fine mapping of Rcr1 and analyses of its effect on transcriptome patterns during infection by Plasmodiophora brassicae

(2015) Mingguang Chu et al.   BMC GENOMICS

The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases

(2015) Arne Schwelm et al.   Scientific Reports

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Clubroot (Plasmodiophora brassicae) on canola and other Brassica species – disease development, epidemiology and management

(2013) Stephen E. Strelkov et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Laser Microdissection Coupled to Transcriptional Profiling of Arabidopsis Roots Inoculated by Plasmodiophora brassicae Indicates a Role for Brassinosteroids in Clubroot Formation

(2013) Astrid Schuller et al.   PLANT AND CELL PHYSIOLOGY

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Qualimap: evaluating next-generation sequencing alignment data

(2012) Fernando García-Alcalde et al.   BIOINFORMATICS

Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4

(2012) Chun-yu Li et al.   BMC GENOMICS

RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles

(2011) K. H. Kim et al.   DNA RESEARCH

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Brassinosteroid-mediated stress tolerance in Arabidopsis shows interactions with abscisic acid, ethylene and salicylic acid pathways

(2010) Uday K Divi et al.   BMC PLANT BIOLOGY

Salicylic Acid, a Multifaceted Hormone to Combat Disease

(2009) A. Corina Vlot et al.   Annual Review of Phytopathology

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Identification and evaluation of clubroot resistance of radish chromosome using a Brassica napus–Raphanus sativus monosomic addition line

(2009) Michiko Akaba et al.   BREEDING SCIENCE

Metabolism and Plant Hormone Action During Clubroot Disease

(2009) Jutta Ludwig-Müller et al.   JOURNAL OF PLANT GROWTH REGULATION

The Occurrence and Economic Impact of Plasmodiophora brassicae and Clubroot Disease

(2009) Geoffrey R. Dixon   JOURNAL OF PLANT GROWTH REGULATION

What can we learn from clubroots: alterations in host roots and hormone homeostasis caused by Plasmodiophora brassicae

(2008) Jutta Ludwig-Müller et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Arabidopsis TAO1 is a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB

(2008) T. K. Eitas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA