Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana

Mechanochemical feedback mediates tissue bending required for seedling emergence

(2021) Kristoffer Jonsson et al.   CURRENT BIOLOGY

Jasmonate biosynthesis arising from altered cell walls is prompted by turgor-driven mechanical compression

(2021) Stefan Mielke et al.   Science Advances

Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems

(2021) Keita Matsuoka et al.   Communications Biology

Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots

(2020) Feng Zhou et al.   CELL

The Arabidopsis receptor kinase STRUBBELIG regulates the response to cellulose deficiency

(2020) Ajeet Chaudhary et al.   PLoS Genetics

Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots

(2020) Lukas Hoermayer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rocks in the auxin stream: Wound-induced auxin accumulation and ERF115 expression synergistically drive stem cell regeneration

(2020) Balkan Canher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell-cell adhesion in plant grafting is facilitated by β-1,4-glucanases

(2020) Michitaka Notaguchi et al.   SCIENCE

An in vitro grafting method to quantify mechanical forces of adhering tissues

(2020) Yaichi Kawakatsu et al.   Plant Biotechnology

Mobile PEAR transcription factors integrate positional cues to prime cambial growth

(2019) Shunsuke Miyashima et al.   NATURE

Damage on plants activates Ca2+-dependent metacaspases for release of immunomodulatory peptides

(2019) Tim Hander et al.   SCIENCE

DOF2.1 Controls Cytokinin-Dependent Vascular Cell Proliferation Downstream of TMO5/LHW

(2019) Wouter Smet et al.   CURRENT BIOLOGY

A Jasmonate Signaling Network Activates Root Stem Cells and Promotes Regeneration

(2019) Wenkun Zhou et al.   CELL

Re-activation of Stem Cell Pathways for Pattern Restoration in Plant Wound Healing

(2019) Petra Marhava et al.   CELL

Changes in the Distribution of Pectin in Root Border Cells Under Aluminum Stress

(2019) Teruki Nagayama et al.   Frontiers in Plant Science

OUP accepted manuscript

(2018)   BIOINFORMATICS

A protocol for combining fluorescent proteins with histological stains for diverse cell wall components

(2018) Robertas Ursache et al.   PLANT JOURNAL

Transcriptome dynamics atArabidopsisgraft junctions reveal an intertissue recognition mechanism that activates vascular regeneration

(2018) Charles W. Melnyk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The plant cell wall integrity maintenance and immune signaling systems cooperate to control stress responses inArabidopsis thaliana

(2018) Timo Engelsdorf et al.   Science Signaling

PHB3 Maintains Root Stem Cell Niche Identity through ROS-Responsive AP2/ERF Transcription Factors in Arabidopsis

(2018) Xiangpei Kong et al.   Cell Reports

A Dual sgRNA Approach for Functional Genomics in Arabidopsis thaliana

(2018) Laurens Pauwels et al.   G3-Genes Genomes Genetics

The plant cell wall integrity maintenance and immune signaling systems cooperate to control stress responses inArabidopsis thaliana

(2018) Timo Engelsdorf et al.   Science Signaling

SHOU4 Proteins Regulate Trafficking of Cellulose Synthase Complexes to the Plasma Membrane

(2018) Joanna K. Polko et al.   CURRENT BIOLOGY

Glutamate triggers long-distance, calcium-based plant defense signaling

(2018) Masatsugu Toyota et al.   SCIENCE

Anisotropic growth is achieved through the additive mechanical effect of material anisotropy and elastic asymmetry

(2018) Firas Bou Daher et al.   eLife

Applying the INTACT method to purify endosperm nuclei and to generate parental-specific epigenome profiles

(2017) Jordi Moreno-Romero et al.   Nature Protocols

agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update

(2017) Tian Tian et al.   NUCLEIC ACIDS RESEARCH

Cellulose-Derived Oligomers Act as Damage-Associated Molecular Patterns and Trigger Defense-Like Responses

(2017) Clarice de Azevedo Souza et al.   PLANT PHYSIOLOGY

The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis

(2017) Andrés Ritter et al.   Nature Communications

The transcription factor OBP4 controls root growth and promotes callus formation

(2016) Elena Ramirez-Parra et al.   NEW PHYTOLOGIST

Differential Cellular Control by Cotyledon-Derived Phytohormones Involved in Graft Reunion of Arabidopsis Hypocotyls

(2016) Keita Matsuoka et al.   PLANT AND CELL PHYSIOLOGY

WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis

(2016) Akira Iwase et al.   PLANT CELL

A Developmental Framework for Graft Formation and Vascular Reconnection in Arabidopsis thaliana

(2015) Charles W. Melnyk et al.   CURRENT BIOLOGY

The Control of Growth Symmetry Breaking in the Arabidopsis Hypocotyl

(2015) Alexis Peaucelle et al.   CURRENT BIOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Plant immunity triggered by engineered in vivo release of oligogalacturonides, damage-associated molecular patterns

(2015) Manuel Benedetti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

XTH20andXTH19regulated by ANAC071 under auxin flow are involved in cell proliferation in incisedArabidopsisinflorescence stems

(2014) Weerasak Pitaksaringkarn et al.   PLANT JOURNAL

The Cellulase KORRIGAN Is Part of the Cellulose Synthase Complex

(2014) T. Vain et al.   PLANT PHYSIOLOGY

Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes

(2014) Huan Shu et al.   GENOME BIOLOGY

FLYING SAUCER1 Is a Transmembrane RING E3 Ubiquitin Ligase That Regulates the Degree of Pectin Methylesterification in Arabidopsis Seed Mucilage

(2013) C. Voiniciuc et al.   PLANT CELL

A Comparative Genome Analysis of PME and PMEI Families Reveals the Evolution of Pectin Metabolism in Plant Cell Walls

(2013) Maojun Wang et al.   PLoS One

ERF115 Controls Root Quiescent Center Cell Division and Stem Cell Replenishment

(2013) J. Heyman et al.   SCIENCE

Plant Cell Wall Homeostasis Is Mediated by Brassinosteroid Feedback Signaling

(2012) Sebastian Wolf et al.   CURRENT BIOLOGY

The AP2/ERF Transcription Factor WIND1 Controls Cell Dedifferentiation in Arabidopsis

(2011) Akira Iwase et al.   CURRENT BIOLOGY

Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis

(2011) M. Asahina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expression of DOF genes identifies early stages of vascular development in Arabidopsis leaves

(2010) Jason Gardiner et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

A gain-of-function mutation in IAA18 alters Arabidopsis embryonic apical patterning

(2009) S. E. Ploense et al.   DEVELOPMENT

Dof5.6/HCA2, a Dof Transcription Factor Gene, Regulates Interfascicular Cambium Formation and Vascular Tissue Development in Arabidopsis

(2009) Y. Guo et al.   PLANT CELL

The Plant NADPH Oxidase RBOHD Mediates Rapid Systemic Signaling in Response to Diverse Stimuli

(2009) G. Miller et al.   Science Signaling

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

The DOF transcription factor OBP1 is involved in cell cycle regulation inArabidopsis thaliana

(2008) Aleksandra Skirycz et al.   PLANT JOURNAL

Wound-Induced Endogenous Jasmonates Stunt Plant Growth by Inhibiting Mitosis

(2008) Yi Zhang et al.   PLoS One