Ecological succession reveals potential signatures of marine–terrestrial transition in salt marsh fungal communities

Fungal Traits That Drive Ecosystem Dynamics on Land

(2015) Kathleen K. Treseder et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Composition of fungal and bacterial communities in forest litter and soil is largely determined by dominant trees

(2015) Michaela Urbanová et al.   SOIL BIOLOGY & BIOCHEMISTRY

Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning

(2014) Francisco Dini-Andreote et al.   ISME Journal

Microsporidia-like parasites of amoebae belong to the early fungal lineage Rozellomycota

(2014) Daniele Corsaro et al.   PARASITOLOGY RESEARCH

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

(2014) Dylan P. Smith et al.   PLoS One

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Plant succession as an integrator of contrasting ecological time scales

(2014) Lawrence R. Walker et al.   TRENDS IN ECOLOGY & EVOLUTION

Analysis of soil fungal communities by amplicon pyrosequencing: current approaches to data analysis and the introduction of the pipeline SEED

(2013) Tomáš Větrovský et al.   BIOLOGY AND FERTILITY OF SOILS

Food Web Assembly at the Landscape Scale: Using Stable Isotopes to Reveal Changes in Trophic Structure During Succession

(2013) Maarten Schrama et al.   ECOSYSTEMS

Brazilian Microbiome Project: Revealing the Unexplored Microbial Diversity—Challenges and Prospects

(2013) Victor Satler Pylro et al.   MICROBIAL ECOLOGY

Contrasting primary successional trajectories of fungi and bacteria in retreating glacier soils

(2013) Shawn P. Brown et al.   MOLECULAR ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Seasonal dynamics of fungal communities in a temperate oak forest soil

(2013) Jana Voříšková et al.   NEW PHYTOLOGIST

ITS1 Copy Number Varies among Batrachochytrium dendrobatidis Strains: Implications for qPCR Estimates of Infection Intensity from Field-Collected Amphibian Skin Swabs

(2013) Ana V. Longo et al.   PLoS One

Ecosystem assembly rules: the interplay of green and brown webs during salt marsh succession

(2012) Maarten Schrama et al.   ECOLOGY

Functional and ecological consequences of saprotrophic fungus–grazer interactions

(2012) Thomas W Crowther et al.   ISME Journal

Response of salt-marsh carbon accumulation to climate change

(2012) Matthew L. Kirwan et al.   NATURE

Coastal eutrophication as a driver of salt marsh loss

(2012) Linda A. Deegan et al.   NATURE

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Marine Fungi: Their Ecology and Molecular Diversity

(2011) Thomas A. Richards et al.   Annual Review of Marine Science

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing

(2011) RAKEL BLAALID et al.   MOLECULAR ECOLOGY

Contrasting Diversity Patterns of Crenarchaeal, Bacterial and Fungal Soil Communities in an Alpine Landscape

(2011) Lucie Zinger et al.   PLoS One

Methane uptake in salt-affected soils shows low sensitivity to salt addition

(2011) Jinfeng Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

(2010) Eva Bellemain et al.   BMC MICROBIOLOGY

Patterns of fungal diversity and composition along a salinity gradient

(2010) Devon J Mohamed et al.   ISME Journal

The use of chronosequences in studies of ecological succession and soil development

(2010) Lawrence R. Walker et al.   JOURNAL OF ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Changes through time: integrating microorganisms into the study of succession

(2010) Noah Fierer et al.   RESEARCH IN MICROBIOLOGY

Fungal Diversity in Deep-Sea Hydrothermal Ecosystems

(2009) T. Le Calvez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Community niche predicts the functioning of denitrifying bacterial assemblages

(2009) Joana F. Salles et al.   ECOLOGY

Biodiversity of arbuscular mycorrhizal fungi in roots and soils of two salt marshes

(2009) Petra Wilde et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial diversity in alpine tundra soils correlates with snow cover dynamics

(2009) Lucie Zinger et al.   ISME Journal

The changing global carbon cycle: linking plant-soil carbon dynamics to global consequences

(2009) F. Stuart Chapin III et al.   JOURNAL OF ECOLOGY

Does grassland vegetation drive soil microbial diversity?

(2009) P. Millard et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Microbial communities and their relevance for ecosystem models: Decomposition as a case study

(2009) Krista L. McGuire et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial contributions to climate change through carbon cycle feedbacks

(2008) Richard D Bardgett et al.   ISME Journal

Terrestrial ecosystem carbon dynamics and climate feedbacks

(2008) Martin Heimann et al.   NATURE

Plant-driven selection of microbes

(2008) Anton Hartmann et al.   PLANT AND SOIL

Enzyme activities and microbial biomass in topsoil layer during spontaneous succession in spoil heaps after brown coal mining

(2008) Petr Baldrian et al.   SOIL BIOLOGY & BIOCHEMISTRY