Microbial mutualism dynamics governed by dose-dependent toxicity of cross-fed nutrients

Principles for designing synthetic microbial communities

(2016) Nathan I Johns et al.   CURRENT OPINION IN MICROBIOLOGY

Engineering microbial consortia for controllable outputs

(2016) Stephen R Lindemann et al.   ISME Journal

Synthetic Ecology of Microbes: Mathematical Models and Applications

(2016) Ali R. Zomorrodi et al.   JOURNAL OF MOLECULAR BIOLOGY

MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis

(2016) Adrien Ducret et al.   Nature Microbiology

Gene Deletions Resulting in Increased Nitrogen Release by Azotobacter vinelandii: Application of a Novel Nitrogen Biosensor

(2015) Brett M. Barney et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Use of plant colonizing bacteria as chassis for transfer of N 2 -fixation to cereals

(2015) Barney A Geddes et al.   CURRENT OPINION IN BIOTECHNOLOGY

N2-fixation, ammonium release and N-transfer to the microbial and classical food web within a plankton community

(2015) Birgit Adam et al.   ISME Journal

N2gas is an effective fertilizer for bioethanol production byZymomonas mobilis

(2015) Timothy A. Kremer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic dependencies drive species co-occurrence in diverse microbial communities

(2015) Aleksej Zelezniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Black Queen evolution: the role of leakiness in structuring microbial communities

(2015) J. Jeffrey Morris   TRENDS IN GENETICS

Syntrophic exchange in synthetic microbial communities

(2014) M. T. Mee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Niche engineering demonstrates a latent capacity for fungal-algal mutualism

(2014) E. F. Y. Hom et al.   SCIENCE

From Metabolism to Ecology: Cross-Feeding Interactions Shape the Balance between Polymicrobial Conflict and Mutualism

(2012) Sylvie Estrela et al.   AMERICAN NATURALIST

Association with an Ammonium-Excreting Bacterium Allows Diazotrophic Culture of Oil-Rich Eukaryotic Microalgae

(2012) Juan Cesar Federico Ortiz-Marquez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Syntrophic metabolism of a co-culture containing Clostridium cellulolyticum and Rhodopseudomonas palustris for hydrogen production

(2012) Yongqin Jiao et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

Involvement of the ammonium transporter AmtB in nitrogenase regulation and ammonium excretion in Pseudomonas stutzeri A1501

(2012) Tao Zhang et al.   RESEARCH IN MICROBIOLOGY

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

Short- and medium-chain fatty acids exhibit antimicrobial activity for oral microorganisms

(2011) Chifu B. Huang et al.   ARCHIVES OF ORAL BIOLOGY

Using artificial systems to explore the ecology and evolution of symbioses

(2011) Babak Momeni et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Calvin Cycle Flux, Pathway Constraints, and Substrate Oxidation State Together Determine the H2 Biofuel Yield in Photoheterotrophic Bacteria

(2011) J. B. McKinlay et al.   mBio

Identification of Multiresistant Salmonella Isolates Capable of Subsisting on Antibiotics

(2010) A. E. Barnhill et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Production of Hydrogen Gas from Light and the Inorganic Electron Donor Thiosulfate by Rhodopseudomonas palustris

(2010) J. J. Huang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Statistical optimization of biohydrogen production from sucrose by a co-culture of Clostridium acidisoli and Rhodobacter sphaeroides

(2010) Qin Sun et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

Carbon dioxide fixation as a central redox cofactor recycling mechanism in bacteria

(2010) J. B. McKinlay et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid evolution of stability and productivity at the origin of a microbial mutualism

(2010) K. L. Hillesland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct Exchange of Electrons Within Aggregates of an Evolved Syntrophic Coculture of Anaerobic Bacteria

(2010) Z. M. Summers et al.   SCIENCE

Environments that Induce Synthetic Microbial Ecosystems

(2010) Niels Klitgord et al.   PLoS Computational Biology

Syntrophy in anaerobic global carbon cycles

(2009) Michael J McInerney et al.   CURRENT OPINION IN BIOTECHNOLOGY

Characterization of marine isoprene-degrading communities

(2009) Laura Acuña Alvarez et al.   ENVIRONMENTAL MICROBIOLOGY

Ecophysiology of syntrophic communities that degrade saturated and unsaturated long-chain fatty acids

(2009) Diana Z. Sousa et al.   FEMS MICROBIOLOGY ECOLOGY

Hydrogen production from glucose by co-culture of Clostridium Butyricum and immobilized Rhodopseudomonas faecalis RLD-53

(2009) Jie Ding et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

A General System for Studying Protein−Protein Interactions in Gram-Negative Bacteria

(2008) Dale A. Pelletier et al.   JOURNAL OF PROTEOME RESEARCH

Defined spatial structure stabilizes a synthetic multispecies bacterial community

(2008) H. J. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA