Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits

Determinants of community structure in the global plankton interactome

(2015) G. Lima-Mendez et al.   SCIENCE

Early-life establishment of the swine gut microbiome and impact on host phenotypes

(2015) Núria Mach et al.   Environmental Microbiology Reports

Dynamic Distribution of the Gut Microbiota and the Relationship with Apparent Crude Fiber Digestibility and Growth Stages in Pigs

(2015) Qing Niu et al.   Scientific Reports

Rethinking “Enterotypes”

(2014) Dan Knights et al.   Cell Host & Microbe

Mycobiota in gastrointestinal diseases

(2014) Pranab K. Mukherjee et al.   Nature Reviews Gastroenterology & Hepatology

Characterization of the Fecal Microbiota of Pigs before and after Inoculation with “Brachyspira hampsonii”

(2014) Matheus O. Costa et al.   PLoS One

Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice

(2014) Merete Ellekilde et al.   Scientific Reports

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

(2013) Abdessamad El Kaoutari et al.   NATURE REVIEWS MICROBIOLOGY

Inclusion of Chicory (Cichorium intybus L.) in Pigs' Diets Affects the Intestinal Microenvironment and the Gut Microbiota

(2012) Haoyu Liu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Impact of the Gut Microbiota on Human Health: An Integrative View

(2012) Jose C. Clemente et al.   CELL

Gut microbiota composition correlates with diet and health in the elderly

(2012) Marcus J. Claesson et al.   NATURE

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Inferring Correlation Networks from Genomic Survey Data

(2012) Jonathan Friedman et al.   PLoS Computational Biology

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks

(2008) Antonio Reverter et al.   BIOINFORMATICS

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH