Comprehensive In Silico Analysis and Transcriptional Profiles Highlight the Importance of Mitochondrial Dicarboxylate Carriers (DICs) on Hypoxia Response in Both Arabidopsis thaliana and Eucalyptus grandis

Genome-wide analysis and expression profile of the bZIP gene family in poplar

(2021) Kai Zhao et al.   BMC PLANT BIOLOGY

An Arabidopsis AT-hook motif nuclear protein mediates somatic embryogenesis and coinciding genome duplication

(2021) Omid Karami et al.   Nature Communications

Plant Mitochondrial Carriers: Molecular Gatekeepers That Help to Regulate Plant Central Carbon Metabolism

(2020) M. Toleco et al.   Plants-Basel

AT-Hook Transcription Factors Restrict Petiole Growth by Antagonizing PIFs

(2020) David S. Favero et al.   CURRENT BIOLOGY

Mitochondrial uncoupling protein-dependent signaling in plant bioenergetics and stress response

(2020) Pedro Barreto et al.   MITOCHONDRION

Metabolic Roles of Plant Mitochondrial Carriers

(2020) Alisdair R. Fernie et al.   Biomolecules

Characterization of In Vivo Function(s) of Members of the Plant Mitochondrial Carrier Family

(2020) Adriano Nunes-Nesi et al.   Biomolecules

Physiological and biochemical responses of Eucalyptus seedlings to hypoxia

(2019) Eduardo F. Medina et al.   ANNALS OF FOREST SCIENCE

Cold acclimation by the CBF–COR pathway in a changing climate: Lessons from Arabidopsis thaliana

(2019) Yukun Liu et al.   PLANT CELL REPORTS

Phosphoproteomics of Arabidopsis Highly ABA-Induced1 identifies AT-Hook–Like10 phosphorylation required for stress growth regulation

(2019) Min May Wong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The EMBL-EBI search and sequence analysis tools APIs in 2019

(2019) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics

(2019) Philippe Fuchs et al.   PLANT JOURNAL

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress

(2019) Sjon Hartman et al.   Nature Communications

PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants

(2018) Chi-Nga Chow et al.   NUCLEIC ACIDS RESEARCH

Brassinosteroid signaling converges with SUPPRESSOR OF PHYTOCHROME B4-#3 to influence the expression of SMALL AUXIN UP RNA genes and hypocotyl growth

(2017) David S. Favero et al.   PLANT JOURNAL

EUCANEXT: an integrated database for the exploration of genomic and transcriptomic data from Eucalyptus species

(2017) Leandro Costa Nascimento et al.   Database-The Journal of Biological Databases and Curation

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

(2016) Carlos Alonso-Blanco et al.   CELL

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases

(2016) Olivier Van Aken et al.   PLANT PHYSIOLOGY

Oxygen Sensing and Signaling

(2015) Joost T. van Dongen et al.   Annual Review of Plant Biology

Oxygen Sensing Coordinates Photomorphogenesis to Facilitate Seedling Survival

(2015) Mohamad Abbas et al.   CURRENT BIOLOGY

Genome-Wide Analysis of the AP2/ERF Family in Eucalyptus grandis: An Intriguing Over-Representation of Stress-Responsive DREB1/CBF Genes

(2015) P. B. Cao et al.   PLoS One

A novel bHLH transcription factor PebHLH35 from Populus euphratica confers drought tolerance through regulating stomatal development, photosynthesis and growth in Arabidopsis

(2014) Yan Dong et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

What happens to plant mitochondria under low oxygen? An omics review of the responses to low oxygen and reoxygenation

(2014) RACHEL SHINGAKI-WELLS et al.   PLANT CELL AND ENVIRONMENT

The tapetal AHL family protein TEK determines nexine formation in the pollen wall

(2014) Yue Lou et al.   Nature Communications

PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors

(2013) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Cell-to-Cell Movement of Two Interacting AT-Hook Factors inArabidopsisRoot Vascular Tissue Patterning

(2013) Jing Zhou et al.   PLANT CELL

The Membrane-Bound NAC Transcription Factor ANAC013 Functions in Mitochondrial Retrograde Regulation of the Oxidative Stress Response in Arabidopsis

(2013) I. De Clercq et al.   PLANT CELL

How unique is the low oxygen response? An analysis of the anaerobic response during germination and comparison with abiotic stress in rice and Arabidopsis

(2013) Reena Narsai et al.   Frontiers in Plant Science

The mitochondrial transporter family SLC25: Identification, properties and physiopathology

(2012) Ferdinando Palmieri   MOLECULAR ASPECTS OF MEDICINE

Role of DREBs in regulation of abiotic stress responses in plants

(2011) C. Lata et al.   JOURNAL OF EXPERIMENTAL BOTANY

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia

(2011) Reena Narsai et al.   NEW PHYTOLOGIST

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Coexpression-Based Clustering of Arabidopsis Root Genes Predicts Functional Modules in Early Phosphate Deficiency Signaling

(2011) W.-D. Lin et al.   PLANT PHYSIOLOGY

Overexpression of AHL20 Negatively Regulates Defenses in Arabidopsis

(2010) Haibin Lu et al.   Journal of Integrative Plant Biology

EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar

(2010) Sylvain Legay et al.   NEW PHYTOLOGIST

AGRIS: the Arabidopsis Gene Regulatory Information Server, an update

(2010) A. Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Defining the Mitochondrial Stress Response in Arabidopsis thaliana

(2009) Olivier Van Aken et al.   Molecular Plant

The N-end rule pathway promotes seed germination and establishment through removal of ABA sensitivity in Arabidopsis

(2009) T. J. Holman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular identification of threeArabidopsis thalianamitochondrial dicarboxylate carrier isoforms: organ distribution, bacterial expression, reconstitution into liposomes and functional characterization

(2008) Luigi Palmieri et al.   BIOCHEMICAL JOURNAL

Differential Response of Gray Poplar Leaves and Roots Underpins Stress Adaptation during Hypoxia

(2008) J. Kreuzwieser et al.   PLANT PHYSIOLOGY