Variation and transmission of the human gut microbiota across multiple familial generations
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Variation and transmission of the human gut microbiota across multiple familial generations
Authors
Keywords
-
Journal
Nature Microbiology
Volume 7, Issue 1, Pages 87-96
Publisher
Springer Science and Business Media LLC
Online
2021-12-31
DOI
10.1038/s41564-021-01021-8
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Bacterial Baptism: Scientific, Medical, and Regulatory Issues Raised by Vaginal Seeding of C-Section-Born Babies
- (2020) Noel T. Mueller et al. JOURNAL OF LAW MEDICINE & ETHICS
- Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
- (2020) Sara Vieira-Silva et al. NATURE
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0
- (2020) Francesco Asnicar et al. Nature Communications
- Gut microbiome variation is associated to Multiple Sclerosis phenotypic subtypes
- (2020) Tatjana Reynders et al. Annals of Clinical and Translational Neurology
- Transmission of human-associated microbiota along family and social networks
- (2019) Ilana L. Brito et al. Nature Microbiology
- The neuroactive potential of the human gut microbiota in quality of life and depression
- (2019) Mireia Valles-Colomer et al. Nature Microbiology
- The human microbiome in health and disease: hype or hope
- (2019) Gwen Falony et al. ACTA CLINICA BELGICA
- Interactive Tree Of Life (iTOL) v4: recent updates and new developments
- (2019) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses
- (2019) Sara Vieira-Silva et al. Nature Microbiology
- Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth
- (2019) Yan Shao et al. NATURE
- Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life
- (2018) Moran Yassour et al. Cell Host & Microbe
- Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome
- (2018) Pamela Ferretti et al. Cell Host & Microbe
- Selective maternal seeding and environment shape the human gut microbiome
- (2018) Katri Korpela et al. GENOME RESEARCH
- Richness and ecosystem development across faecal snapshots of the gut microbiota
- (2018) Gwen Falony et al. Nature Microbiology
- Environment dominates over host genetics in shaping human gut microbiota
- (2018) Daphna Rothschild et al. NATURE
- Temporal development of the gut microbiome in early childhood from the TEDDY study
- (2018) Christopher J. Stewart et al. NATURE
- Transmission modes of the mammalian gut microbiota
- (2018) Andrew H. Moeller et al. SCIENCE
- Microbial strain-level population structure and genetic diversity from metagenomes
- (2017) Duy Tin Truong et al. GENOME RESEARCH
- Subspecies in the global human gut microbiome
- (2017) Paul I Costea et al. Molecular Systems Biology
- Quantitative microbiome profiling links gut community variation to microbial load
- (2017) Doris Vandeputte et al. NATURE
- Transmission of the gut microbiota: spreading of health
- (2017) Hilary P. Browne et al. NATURE REVIEWS MICROBIOLOGY
- Cleanliness in context: reconciling hygiene with a modern microbial perspective
- (2017) Roo Vandegrift et al. Microbiome
- FamAgg: an R package to evaluate familial aggregation of traits in large pedigrees
- (2016) Johannes Rainer et al. BIOINFORMATICS
- MOCAT2: a metagenomic assembly, annotation and profiling framework
- (2016) Jens Roat Kultima et al. BIOINFORMATICS
- Body-mass index and all-cause mortality: individual-participant-data meta-analysis of 239 prospective studies in four continents
- (2016) Emanuele Di Angelantonio et al. LANCET
- ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
- (2016) Jaime Huerta-Cepas et al. MOLECULAR BIOLOGY AND EVOLUTION
- Diet-induced extinctions in the gut microbiota compound over generations
- (2016) Erica D. Sonnenburg et al. NATURE
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- Population-level analysis of gut microbiome variation
- (2016) Gwen Falony et al. SCIENCE
- Brief Report:Dialisteras a Microbial Marker of Disease Activity in Spondyloarthritis
- (2016) Raul Y. Tito et al. Arthritis & Rheumatology
- Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut Microbiome
- (2016) Hailiang Xie et al. Cell Systems
- Species–function relationships shape ecological properties of the human gut microbiome
- (2016) Sara Vieira-Silva et al. Nature Microbiology
- Societal Burden and Correlates of Acute Gastroenteritis in Families with Preschool Children
- (2016) Lapo Mughini-Gras et al. Scientific Reports
- Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life
- (2015) Fredrik Bäckhed et al. Cell Host & Microbe
- Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates
- (2015) Doris Vandeputte et al. GUT
- MetaPhlAn2 for enhanced metagenomic taxonomic profiling
- (2015) Duy Tin Truong et al. NATURE METHODS
- Computing Generalized Method of Moments and Generalized Empirical Likelihood withR
- (2015) Pierre Chaussé Journal of Statistical Software
- Beta Regression inR
- (2015) Francisco Cribari-Neto et al. Journal of Statistical Software
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission
- (2014) Colin J. Worby et al. GENETICS
- The kinship2 R Package for Pedigree Data
- (2014) Jason P. Sinnwell et al. HUMAN HEREDITY
- An integrated catalog of reference genes in the human gut microbiome
- (2014) Junhua Li et al. NATURE BIOTECHNOLOGY
- Transmission of Acute Gastroenteritis and Respiratory Illness From Children to Parents
- (2014) Anne Sylvia Sacri et al. PEDIATRIC INFECTIOUS DISEASE JOURNAL
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Monitoring microbiological changes in drinking water systems using a fast and reproducible flow cytometric method
- (2013) E.I. Prest et al. WATER RESEARCH
- Pseudomonas aeruginosa: new insights into pathogenesis and host defenses
- (2013) Shaan L. Gellatly et al. Pathogens and Disease
- Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics
- (2012) Ian Holmes et al. PLoS One
- PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers
- (2011) William A. Walters et al. BIOINFORMATICS
- Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets
- (2011) Robert Schmieder et al. PLoS One
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Oxalobacter formigenes May Reduce the Risk of Calcium Oxalate Kidney Stones
- (2008) D. W. Kaufman et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started