Meiosis in Polyploids and Implications for Genetic Mapping: A Review

Homoeologous exchanges in allopolyploids: how Brassica napus established self‐control!

(2021) Pierre Sourdille et al.   NEW PHYTOLOGIST

Ph2 encodes the mismatch repair protein MSH7-3D that inhibits wheat homoeologous recombination

(2021) Heïdi Serra et al.   Nature Communications

The recombination landscape and multiple QTL mapping in a Solanum tuberosum cv. ‘Atlantic’-derived F1 population

(2021) Guilherme da Silva Pereira et al.   HEREDITY

A Duplicated Copy of the Meiotic Gene ZIP4 Preserves up to 50% Pollen Viability and Grain Number in Polyploid Wheat

(2021) Abdul Kader Alabdullah et al.   Biology-Basel

Interacting genomic landscapes of REC8-cohesin, chromatin and meiotic recombination in Arabidopsis thaliana

(2020) Christophe Lambing et al.   PLANT CELL

Derived alleles of two axis proteins affect meiotic traits in autotetraploid Arabidopsis arenosa

(2020) Chris Morgan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Mapping in Autohexaploid Sweet Potato with Low-Coverage NGS-based Genotyping Data

(2020) Eiji Yamamoto et al.   G3-Genes Genomes Genetics

ASY1 acts as a dosage-dependent antagonist of telomere-led recombination and mediates crossover interference inArabidopsis

(2020) Christophe Lambing et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A novel allele of ASY3 is associated with greater meiotic stability in autotetraploid Arabidopsis lyrata

(2020) Paul J. Seear et al.   PLoS Genetics

Chromosome Pairing in Polyploid Grasses

(2020) Radim Svačina et al.   Frontiers in Plant Science

A major quantitative trait locus on chromosome A9, BnaPh1 , controls homoeologous recombination in Brassica napus

(2020) Erin E. Higgins et al.   NEW PHYTOLOGIST

High-Resolution Linkage Map and QTL Analyses of Fruit Firmness in Autotetraploid Blueberry

(2020) Francesco Cappai et al.   Frontiers in Plant Science

polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids

(2019) Lindsay V. Clark et al.   G3-Genes Genomes Genetics

A conserved filamentous assembly underlies the structure of the meiotic chromosome axis

(2019) Alan M V West et al.   eLife

Inherited allelic variants and novel karyotype changes influence fertility and genome stability in Brassica allohexaploids

(2019) Roman Gaebelein et al.   NEW PHYTOLOGIST

Building bridges to move recombination complexes

(2019) Emeline Dubois et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of an Axiom Sugarcane100K SNP array for genetic map construction and QTL identification

(2019) Qian You et al.   THEORETICAL AND APPLIED GENETICS

Reducing MSH4 copy number prevents meiotic crossovers between non-homologous chromosomes in Brassica napus

(2019) Adrián Gonzalo et al.   Nature Communications

Interspecific introgression mediates adaptation to whole genome duplication

(2019) Sarah Marburger et al.   Nature Communications

Unraveling the Hexaploid Sweetpotato Inheritance Using Ultra-Dense Multilocus Mapping

(2019) Marcelo Mollinari et al.   G3-Genes Genomes Genetics

A Co-Expression Network in Hexaploid Wheat Reveals Mostly Balanced Expression and Lack of Significant Gene Loss of Homeologous Meiotic Genes Upon Polyploidization

(2019) Abdul Kader Alabdullah et al.   Frontiers in Plant Science

A meiotic XPF–ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation

(2018) Arnaud De Muyt et al.   GENES & DEVELOPMENT

Nucleosomes and DNA methylation shape meiotic DSB frequency inArabidopsis thalianatransposons and gene regulatory regions

(2018) Kyuha Choi et al.   GENOME RESEARCH

Epigenetic activation of meiotic recombination nearArabidopsis thalianacentromeres via loss of H3K9me2 and non-CG DNA methylation

(2018) Charles J. Underwood et al.   GENOME RESEARCH

Identification of ASYNAPTIC4, a component of the meiotic chromosome axis

(2018) Aurélie Chambon et al.   PLANT PHYSIOLOGY

Tools for Genetic Studies in Experimental Populations of Polyploids

(2018) Peter M. Bourke et al.   Frontiers in Plant Science

Speciation Success of Polyploid Plants Closely Relates to the Regulation of Meiotic Recombination

(2018) Alexandre Pelé et al.   Frontiers in Plant Science

Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synapsis, Ploidy Level, and the Ph1 Locus

(2018) Azahara Carmen Martín et al.   Frontiers in Plant Science

Natural variation and dosage of the HEI10 meiotic E3 ligase controlArabidopsiscrossover recombination

(2017) Piotr A. Ziolkowski et al.   GENES & DEVELOPMENT

Genomic features shaping the landscape of meiotic double-strand-break hotspots in maize

(2017) Yan He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Segregation for fertility and meiotic stability in novel Brassica allohexaploids

(2017) Margaret W. Mwathi et al.   THEORETICAL AND APPLIED GENETICS

An ultra-dense integrated linkage map for hexaploid chrysanthemum enables multi-allelic QTL analysis

(2017) Geert van Geest et al.   THEORETICAL AND APPLIED GENETICS

Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas

(2017) Alexandre Pelé et al.   PLoS Genetics

The challenge of evolving stable polyploidy: could an increase in “crossover interference distance” play a central role?

(2016) Kirsten Bomblies et al.   CHROMOSOMA

Meiosis in autopolyploid and allopolyploid Arabidopsis

(2016) Andrew Lloyd et al.   CURRENT OPINION IN PLANT BIOLOGY

Chromatin Domains: The Unit of Chromosome Organization

(2016) Jesse R. Dixon et al.   MOLECULAR CELL

A step change in the transfer of interspecific variation into wheat fromAmblyopyrum muticum

(2016) Julie King et al.   PLANT BIOTECHNOLOGY JOURNAL

A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome

(2016) Wayne E. Clarke et al.   THEORETICAL AND APPLIED GENETICS

Distinct subgenome stabilities in synthesized Brassica allohexaploids

(2016) Jiannan Zhou et al.   THEORETICAL AND APPLIED GENETICS

Meiotic cohesin-based chromosome structure is essential for homologous chromosome pairing in Schizosaccharomyces pombe

(2015) Da-Qiao Ding et al.   CHROMOSOMA

New insights into the mechanism of DNA mismatch repair

(2015) Gloria X. Reyes et al.   CHROMOSOMA

Epigenetic and developmental regulation in plant polyploids

(2015) Qingxin Song et al.   CURRENT OPINION IN PLANT BIOLOGY

DNA methylation epigenetically silences crossover hot spots and controls chromosomal domains of meiotic recombination inArabidopsis

(2015) Nataliya E. Yelina et al.   GENES & DEVELOPMENT

The Double-Reduction Landscape in Tetraploid Potato as Revealed by a High-Density Linkage Map

(2015) P. M. Bourke et al.   GENETICS

Spatial distribution of centromeres and telomeres at interphase varies amongBrachypodiumspecies

(2015) Dominika Idziak et al.   JOURNAL OF EXPERIMENTAL BOTANY

Meiosis evolves: adaptation to external and internal environments

(2015) Kirsten Bomblies et al.   NEW PHYTOLOGIST

Recombination, Pairing, and Synapsis of Homologs during Meiosis

(2015) Denise Zickler et al.   Cold Spring Harbor Perspectives in Biology

Involvement of the Cohesin Cofactor PDS5 (SPO76) During Meiosis and DNA Repair in Arabidopsis thaliana

(2015) Mónica Pradillo et al.   Frontiers in Plant Science

The origin of unusual chromosome constitutions among newly formed allopolyploids

(2014) Sylwia Oleszczuk et al.   AMERICAN JOURNAL OF BOTANY

A comprehensive genetic map of sugarcane that provides enhanced map coverage and integrates high-throughput Diversity Array Technology (DArT) markers

(2014) Karen S Aitken et al.   BMC GENOMICS

Evolutionary Origins and Dynamics of Octoploid Strawberry Subgenomes Revealed by Dense Targeted Capture Linkage Maps

(2014) Jacob A. Tennessen et al.   Genome Biology and Evolution

Meiotic Gene Evolution: Can You Teach a New Dog New Tricks?

(2014) Andrew H. Lloyd et al.   MOLECULAR BIOLOGY AND EVOLUTION

Homoeologous Chromosome Sorting and Progression of Meiotic Recombination in Brassica napus: Ploidy Does Matter!

(2014) L. Grandont et al.   PLANT CELL

The BOY NAMED SUE Quantitative Trait Locus Confers Increased Meiotic Stability to an Adapted Natural Allopolyploid of Arabidopsis

(2014) I. M. Henry et al.   PLANT CELL

Silencing of a metaphase I-specific gene results in a phenotype similar to that of the Pairing homeologous 1 (Ph1) gene mutations

(2014) Ramanjot Bhullar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids

(2014) M. R. Woodhouse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CDKG1 protein kinase is essential for synapsis and male meiosis at high ambient temperature inArabidopsis thaliana

(2014) Tao Zheng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

(2014) Shengyi Liu et al.   Nature Communications

Licensing MLH1 sites for crossover during meiosis

(2014) Azahara C. Martín et al.   Nature Communications

Chromosome segregation in plant meiosis

(2014) Linda Zamariola et al.   Frontiers in Plant Science

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

(2014) Isobel AP Parkin et al.   GENOME BIOLOGY

Meiotic Adaptation to Genome Duplication in Arabidopsis arenosa

(2013) Levi Yant et al.   CURRENT BIOLOGY

Meiosis and Its Deviations in Polyploid Plants

(2013) L. Grandont et al.   CYTOGENETIC AND GENOME RESEARCH

Meiosis and sexual fertility of autotetraploid clones of greater yam Dioscorea alata L.

(2013) K. Abraham et al.   GENETIC RESOURCES AND CROP EVOLUTION

Crossover rate between homologous chromosomes and interference are regulated by the addition of specific unpaired chromosomes inBrassica

(2013) Loreto Suay et al.   NEW PHYTOLOGIST

Genetic analysis of the Replication Protein A large subunit family in Arabidopsis reveals unique and overlapping roles in DNA repair, meiosis and DNA replication

(2013) B. B. Aklilu et al.   NUCLEIC ACIDS RESEARCH

Linkage Analysis and QTL Mapping Using SNP Dosage Data in a Tetraploid Potato Mapping Population

(2013) Christine A. Hackett et al.   PLoS One

Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat

(2013) Huakun Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Meiotic chromosome pairing behaviour of natural tetraploids and induced autotetraploids of Actinidia chinensis

(2013) Jin-Hu Wu et al.   THEORETICAL AND APPLIED GENETICS

SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids

(2013) Antonio A. F. Garcia et al.   Scientific Reports

Rapid, Repeated, and Clustered Loss of Duplicate Genes in Allopolyploid Plant Populations of Independent Origin

(2012) Richard J.A. Buggs et al.   CURRENT BIOLOGY

Cytoplasmic and Genomic Effects on Meiotic Pairing in Brassica Hybrids and Allotetraploids from Pair Crosses of Three Cultivated Diploids

(2012) Cheng Cui et al.   GENETICS

ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis

(2012) Y. Shen et al.   JOURNAL OF CELL SCIENCE

The Ph1 Locus Suppresses Cdk2-Type Activity during Premeiosis and Meiosis in Wheat

(2012) E. Greer et al.   PLANT CELL

Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids

(2012) Oliver Serang et al.   PLoS One

Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae)

(2012) M. Chester et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inter-Homolog Crossing-Over and Synapsis in Arabidopsis Meiosis Are Dependent on the Chromosome Axis Protein AtASY3

(2012) Maheen Ferdous et al.   PLoS Genetics

The Role of Rice HEI10 in the Formation of Meiotic Crossovers

(2012) Kejian Wang et al.   PLoS Genetics

The Arabidopsis HEI10 Is a New ZMM Protein Related to Zip3

(2012) Liudmila Chelysheva et al.   PLoS Genetics

Genotype calling in tetraploid species from bi-allelic marker data using mixture models

(2011) Roeland E Voorrips et al.   BMC BIOINFORMATICS

Polyploidization increases meiotic recombination frequency in Arabidopsis

(2011) Ales Pecinka et al.   BMC BIOLOGY

Production of viable male unreduced gametes in Brassica interspecific hybrids is genotype specific and stimulated by cold temperatures

(2011) Annaliese S Mason et al.   BMC PLANT BIOLOGY

Have a break: determinants of meiotic DNA double strand break (DSB) formation and processing in plants

(2011) B. Edlinger et al.   JOURNAL OF EXPERIMENTAL BOTANY

Evolution of Polyploid Triticum Wheats under Cultivation: The Role of Domestication, Natural Hybridization and Allopolyploid Speciation in their Diversification

(2011) Y. Matsuoka   PLANT AND CELL PHYSIOLOGY

Chromosome Organization and Dynamics during Interphase, Mitosis, and Meiosis in Plants

(2011) C.-L. Tiang et al.   PLANT PHYSIOLOGY

Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus

(2011) Z. Xiong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organization and dynamics of plant interphase chromosomes

(2011) Ingo Schubert et al.   TRENDS IN PLANT SCIENCE

Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC and CCAB Brassica interspecific hybrids

(2010) Annaliese S. Mason et al.   CHROMOSOME RESEARCH

Inducing chromosome pairing through premature condensation: analysis of wheat interspecific hybrids

(2010) Emilie Knight et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

The first meiosis of resynthesized Brassica napus, a genome blender

(2010) E. Szadkowski et al.   NEW PHYTOLOGIST

Repeated Polyploidy Drove Different Levels of Crossover Suppression between Homoeologous Chromosomes in Brassica napus Allohaploids

(2010) M. Cifuentes et al.   PLANT CELL

Crossovers Get a Boost in Brassica Allotriploid and Allotetraploid Hybrids

(2010) M. Leflon et al.   PLANT CELL

Synthesis of a Brassica trigenomic allohexaploid (B. carinata × B. rapa) de novo and its stability in subsequent generations

(2010) Entang Tian et al.   THEORETICAL AND APPLIED GENETICS

Chromosome Territories

(2010) T. Cremer et al.   Cold Spring Harbor Perspectives in Biology

On the road to diploidization? Homoeolog loss in independently formed populations of the allopolyploid Tragopogon miscellus (Asteraceae)

(2009) Jennifer A Tate et al.   BMC PLANT BIOLOGY

MUTATIONS AND CROP IMPROVEMENT. III. IPOMOEA BATATAS (L.) POIR. (CONVOLVULACEAE)

(2009) ÅKE GUSTAFSSON et al.   HEREDITAS

CDK2 is required for proper homologous pairing, recombination and sex-body formation during male mouse meiosis

(2009) A. Viera et al.   JOURNAL OF CELL SCIENCE

Homoeologous recombination in allopolyploids: the polyploid ratchet

(2009) Robert T. Gaeta et al.   NEW PHYTOLOGIST

Genetic regulation of meiosis in polyploid species: new insights into an old question

(2009) Marta Cifuentes et al.   NEW PHYTOLOGIST

Impact of transposable elements on the organization and function of allopolyploid genomes

(2009) Christian Parisod et al.   NEW PHYTOLOGIST

Genetic Regulation of Meiotic Cross-Overs between Related Genomes in Brassica napus Haploids and Hybrids

(2009) S. D. Nicolas et al.   PLANT CELL

Chromosome and DNA methylation dynamics during meiosis in the autotetraploid Arabidopsis arenosa

(2009) Ana Carvalho et al.   SEXUAL PLANT REPRODUCTION

Cytological analysis of MRE11 protein during early meiotic prophase I in Arabidopsis and tomato

(2008) Leslie D. Lohmiller et al.   CHROMOSOMA

To check or not to check? The application of meiotic studies to plant breeding

(2008) Enrique Martinez-Perez et al.   CURRENT OPINION IN PLANT BIOLOGY

Meiosis in plants: ten years of gene discovery

(2008) R. Mercier et al.   CYTOGENETIC AND GENOME RESEARCH

ASY1 coordinates early events in the plant meiotic recombination pathway

(2008) E. Sanchez-Moran et al.   CYTOGENETIC AND GENOME RESEARCH

Expression and functional analysis of AtMUS81 in Arabidopsis meiosis reveals a role in the second pathway of crossing-over

(2008) James D. Higgins et al.   PLANT JOURNAL

TaASY1 promotes homologous chromosome interactions and is affected by deletion ofPh1

(2008) Scott A. Boden et al.   PLANT JOURNAL

Effective chromosome pairing requires chromatin remodeling at the onset of meiosis

(2008) I. Colas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Plasticity and the Diversity of Polyploid Plants

(2008) A. R. Leitch et al.   SCIENCE

Detailed Dissection of the Chromosomal Region Containing the Ph1 Locus in Wheat Triticum aestivum: With Deletion Mutants and Expression Profiling

(2007) N. Al-Kaff et al.   ANNALS OF BOTANY