Genetic diversity of Leptospira isolates in Lao PDR and genome analysis of an outbreak strain

Human, animal, water source interactions and leptospirosis in Thailand

(2021) Udomsak Narkkul et al.   Scientific Reports

Isolation and propagation of leptospires at 37 °C directly from the mammalian host

(2020) Richard L. Hornsby et al.   Scientific Reports

Circulating genotypes of Leptospira in French Polynesia : An 9-year molecular epidemiology surveillance follow-up study

(2020) Linda Grillová et al.   PLoS Neglected Tropical Diseases

A simple score to predict severe leptospirosis

(2019) Simon Smith et al.   PLoS Neglected Tropical Diseases

Revisiting the taxonomy and evolution of pathogenicity of the genus Leptospira through the prism of genomics

(2019) Antony T. Vincent et al.   PLoS Neglected Tropical Diseases

Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance

(2019) Julien Guglielmini et al.   PLoS Neglected Tropical Diseases

Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens

(2019) Linda Grillová et al.   Frontiers in Microbiology

The Ecology and Evolution of Pangenomes

(2019) Michael A. Brockhurst et al.   CURRENT BIOLOGY

FMLRC: Hybrid long read error correction using an FM-index

(2018) Jeremy R. Wang et al.   BMC BIOINFORMATICS

MUMmer4: A fast and versatile genome alignment system

(2018) Guillaume Marçais et al.   PLoS Computational Biology

Seroprevalence of Leptospirosis and Risk Factor Analysis in Flood-prone Rural Areas in Lao PDR

(2018) Leo Kawaguchi et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Fast and accurate de novo genome assembly from long uncorrected reads

(2017) Robert Vaser et al.   GENOME RESEARCH

Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper

(2017) Jaime Huerta-Cepas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Virulence of the zoonotic agent of leptospirosis: still terra incognita?

(2017) Mathieu Picardeau   NATURE REVIEWS MICROBIOLOGY

Zoonotic and Vector-Borne Diseases in Urban Slums: Opportunities for Intervention

(2017) Federico Costa et al.   TRENDS IN PARASITOLOGY

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

(2017) Ryan R. Wick et al.   PLoS Computational Biology

What Makes a Bacterial Species Pathogenic?:Comparative Genomic Analysis of the Genus Leptospira

(2016) Derrick E. Fouts et al.   PLoS Neglected Tropical Diseases

Global Burden of Leptospirosis: Estimated in Terms of Disability Adjusted Life Years

(2015) Paul R. Torgerson et al.   PLoS Neglected Tropical Diseases

A Systematic Review of the Mortality from Untreated Leptospirosis

(2015) Andrew J. Taylor et al.   PLoS Neglected Tropical Diseases

Global Morbidity and Mortality of Leptospirosis: A Systematic Review

(2015) Federico Costa et al.   PLoS Neglected Tropical Diseases

Orientia, rickettsia, and leptospira pathogens as causes of CNS infections in Laos: a prospective study

(2015) Sabine Dittrich et al.   Lancet Global Health

Viability of Leptospira Isolates from a Human Outbreak in Thailand in Various Water Types, pH, and Temperature Conditions

(2014) Robyn A. Stoddard et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

A Proposed Genus Boundary for the Prokaryotes Based on Genomic Insights

(2014) Q.-L. Qin et al.   JOURNAL OF BACTERIOLOGY

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Epidemiology of Leptospira Transmitted by Rodents in Southeast Asia

(2014) Jean-François Cosson et al.   PLoS Neglected Tropical Diseases

GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis

(2013) Bruno Contreras-Moreira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Reassessment of MLST schemes for Leptospira spp. typing worldwide

(2013) Vanina Varni et al.   INFECTION GENETICS AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Risk Factors and Predictors of Severe Leptospirosis in New Caledonia

(2013) Sarah Tubiana et al.   PLoS Neglected Tropical Diseases

A Single Multilocus Sequence Typing (MLST) Scheme for Seven Pathogenic Leptospira Species

(2013) Siriphan Boonsilp et al.   PLoS Neglected Tropical Diseases

Serovar Diversity of Pathogenic Leptospira Circulating in the French West Indies

(2013) Pascale Bourhy et al.   PLoS Neglected Tropical Diseases

Causes of non-malarial fever in Laos: a prospective study

(2013) Mayfong Mayxay et al.   Lancet Global Health

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Reevaluating Assembly Evaluations with Feature Response Curves: GAGE and Assemblathons

(2012) Francesco Vezzi et al.   PLoS One

Human Leptospira Isolates Circulating in Mayotte (Indian Ocean) Have Unique Serological and Molecular Features

(2011) P. Bourhy et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A novel combination of selective agents for isolation of Leptospira species

(2011) Antara Chakraborty et al.   MICROBIOLOGY AND IMMUNOLOGY

Comparison of Two Multilocus Sequence Based Genotyping Schemes for Leptospira Species

(2011) Ahmed Ahmed et al.   PLoS Neglected Tropical Diseases

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Leptospirosis in the Asia Pacific region

(2009) Ann Florence B Victoriano et al.   BMC INFECTIOUS DISEASES

Detection of pathogenic Leptospira spp. through TaqMan polymerase chain reaction targeting the LipL32 gene

(2009) Robyn A. Stoddard et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Leptospira: the dawn of the molecular genetics era for an emerging zoonotic pathogen

(2009) Albert I. Ko et al.   NATURE REVIEWS MICROBIOLOGY

Development and Validation of a Real-Time PCR for Detection of Pathogenic Leptospira Species in Clinical Materials

(2009) Ahmed Ahmed et al.   PLoS One