Development and Validation of a 36K SNP Array for Radiata Pine (Pinus radiata D.Don)

A genome‐wide SNP genotyping resource for tropical pine tree species

(2021) Colin Jackson et al.   Molecular Ecology Resources

Toward genomic selection in Pinus taeda : Integrating resources to support array design in a complex conifer genome

(2021) Madison Caballero et al.   Applications in Plant Sciences

An Axiom SNP genotyping array for Douglas-fir

(2020) Glenn T. Howe et al.   BMC GENOMICS

Effect of trait’s expression level on single-step genomic evaluation of resistance to Dothistroma needle blight

(2020) Jaroslav Klápště et al.   BMC PLANT BIOLOGY

Development of a single nucleotide polymorphism array for population genomic studies in four European pine species

(2020) Annika Perry et al.   Molecular Ecology Resources

Management of Genetic Diversity in the Era of Genomics

(2020) Theo H. E. Meuwissen et al.   Frontiers in Genetics

Mapping carbon accumulation potential from global natural forest regrowth

(2020) Susan C. Cook-Patton et al.   NATURE

Tree planting has the potential to increase carbon sequestration capacity of forests in the United States

(2020) Grant M. Domke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce ( Picea abies L. Karst) by whole genome resequencing and its transferability to other spruce species

(2020) Carolina Bernhardsson et al.   Molecular Ecology Resources

Limber pine ( Pinus flexilis James) genetic map constructed by exome‐seq provides insight into evolution of disease resistance and a genomic resource for genomics‐based breeding

(2019) Jun‐Jun Liu et al.   PLANT JOURNAL

Exome Resequencing Reveals Evolutionary History, Genomic Diversity, and Targets of Selection in the Conifers Pinus taeda and Pinus elliottii

(2019) Juan J Acosta et al.   Genome Biology and Evolution

Genome‐wide association study identified novel candidate loci affecting wood formation in Norway spruce

(2019) John Baison et al.   PLANT JOURNAL

The global tree restoration potential

(2019) Jean-Francois Bastin et al.   SCIENCE

A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata

(2019) Emily Telfer et al.   PLoS One

Past, present and future of industrial plantation forestry and implication on future timber harvesting technology

(2019) Andrew McEwan et al.   JOURNAL OF FORESTRY RESEARCH

Genomic selection for non-key traits in radiata pine when the documented pedigree is corrected using DNA marker information

(2019) Yongjun Li et al.   BMC GENOMICS

Assessing the sensitivities of genomic selection for growth and wood quality traits in lodgepole pine using Bayesian models

(2019) Nicholas K. Ukrainetz et al.   Tree Genetics & Genomes

Efficiency of genomic prediction across two Eucalyptus nitens seed orchards with different selection histories

(2018) Mari Suontama et al.   HEREDITY

Improving conservation policy with genomics: a guide to integrating adaptive potential into U.S. Endangered Species Act decisions for conservation practitioners and geneticists

(2018) W. C. Funk et al.   CONSERVATION GENETICS

Independent and Joint-GWAS for growth traits in Eucalyptus by assembling genome-wide data for 3373 individuals across four breeding populations

(2018) Bárbara S. F. Müller et al.   NEW PHYTOLOGIST

A catalog of annotated high-confidence SNPs from exome capture and sequencing reveals highly polymorphic genes in Norway spruce (Picea abies)

(2018) Aïda Azaiez et al.   BMC GENOMICS

Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra

(2018) Christian Rellstab et al.   Molecular Ecology Resources

Approaches to variant discovery for conifer transcriptome sequencing

(2018) Emily Telfer et al.   PLoS One

Expected benefit of genomic selection over forward selection in conifer breeding and deployment

(2018) Yongjun Li et al.   PLoS One

Quantitative Genetics and Genomics Converge to Accelerate Forest Tree Breeding

(2018) Dario Grattapaglia et al.   Frontiers in Plant Science

Performance of genomic prediction within and across generations in maritime pine

(2016) Jérôme Bartholomé et al.   BMC GENOMICS

Exome capture from the spruce and pine giga-genomes

(2016) H. Suren et al.   Molecular Ecology Resources

Genomic selection in maritime pine

(2016) Fikret Isik et al.   PLANT SCIENCE

Exploiting genetic diversity from landraces in wheat breeding for adaptation to climate change

(2015) Marta S. Lopes et al.   JOURNAL OF EXPERIMENTAL BOTANY

A practical guide to environmental association analysis in landscape genomics

(2015) Christian Rellstab et al.   MOLECULAR ECOLOGY

High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)

(2015) C. Plomion et al.   Molecular Ecology Resources

A flexible multi-species genome-wide 60K SNP chip developed from pooled resequencing of 240Eucalyptustree genomes across 12 species

(2015) Orzenil B. Silva-Junior et al.   NEW PHYTOLOGIST

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Sequencing and Assembly of the 22-Gb Loblolly Pine Genome

(2014) A. Zimin et al.   GENETICS

Estimation of genealogical coancestry in plant species using a pedigree reconstruction algorithm and application to an oil palm breeding population

(2014) David Cros et al.   THEORETICAL AND APPLIED GENETICS

Using genomic tools to maintain diversity and fitness in conservation programmes

(2013) María Ángeles Rodríguez de Cara et al.   MOLECULAR ECOLOGY

Whole-exome targeted sequencing of the uncharacterized pine genome

(2013) Leandro G. Neves et al.   PLANT JOURNAL

A High-Density Gene Map of Loblolly Pine ( Pinus taeda L.) Based on Exome Sequence Capture Genotyping

(2013) Leandro Gomide Neves et al.   G3-Genes Genomes Genetics

Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments

(2011) M. F. R. Resende et al.   NEW PHYTOLOGIST

Impact of reconstructed pedigrees on progeny-test breeding values in red spruce

(2010) Trevor K. Doerksen et al.   Tree Genetics & Genomes

Altitudinal differentiation in growth and phenology among populations of temperate-zone tree species growing in a common garden

(2009) Yann Vitasse et al.   CANADIAN JOURNAL OF FOREST RESEARCH