Subcellular and regional localization of mRNA translation in midbrain dopamine neurons

Subcellular sequencing of single neurons reveals the dendritic transcriptome of GABAergic interneurons

(2021) Julio D Perez et al.   eLife

Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems

(2021) Shahar Alon et al.   SCIENCE

Spatial RNA Sequencing Identifies Robust Markers of Vulnerable and Resistant Human Midbrain Dopamine Neurons and Their Expression in Parkinson’s Disease

(2021) Julio Aguila et al.   Frontiers in Molecular Neuroscience

Monosomes actively translate synaptic mRNAs in neuronal processes

(2020) Anne Biever et al.   SCIENCE

Classification of Midbrain Dopamine Neurons Using Single-Cell Gene Expression Profiling Approaches

(2020) Jean-Francois Poulin et al.   TRENDS IN NEUROSCIENCES

Ribosome-associated vesicles: A dynamic subcompartment of the endoplasmic reticulum in secretory cells

(2020) Stephen D. Carter et al.   Science Advances

Synaptotagmin-1 is the Ca2+ sensor for fast striatal dopamine release

(2020) Aditi Banerjee et al.   eLife

Local Translation in Perisynaptic Astrocytic Processes Is Specific and Changes after Fear Conditioning

(2020) Noémie Mazaré et al.   Cell Reports

Calcium, Bioenergetics, and Parkinson’s Disease

(2020) Enrico Zampese et al.   Cells

The Gene Ontology resource: enriching a GOld mine

(2020) et al.   NUCLEIC ACIDS RESEARCH

Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+

(2019) Chee-Huat Linus Eng et al.   NATURE

Local protein synthesis is a ubiquitous feature of neuronal pre- and postsynaptic compartments

(2019) Anne-Sophie Hafner et al.   SCIENCE

SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse

(2019) Frank Koopmans et al.   NEURON

Synaptogenesis Stimulates a Proteasome-Mediated Ribosome Reduction in Axons

(2019) Rui O. Costa et al.   Cell Reports

RIM is essential for stimulated but not spontaneous somatodendritic dopamine release in the midbrain

(2019) Brooks G Robinson et al.   eLife

On-Site Ribosome Remodeling by Locally Synthesized Ribosomal Proteins in Axons

(2019) Toshiaki Shigeoka et al.   Cell Reports

Axon TRAP reveals learning-associated alterations in cortical axonal mRNAs in the lateral amgydala

(2019) Linnaea E Ostroff et al.   eLife

Dopamine Secretion Is Mediated by Sparse Active Zone-like Release Sites

(2018) Changliang Liu et al.   CELL

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain

(2018) Arpiar Saunders et al.   CELL

Dopamine Triggers the Maturation of Striatal Spiny Projection Neuron Excitability during a Critical Period

(2018) Ori J. Lieberman et al.   NEURON

An Alternative Exon of CAPS2 Influences Catecholamine Loading into LDCVs of Chromaffin Cells

(2018) Olga Ratai et al.   JOURNAL OF NEUROSCIENCE

Active presynaptic ribosomes in the mammalian brain, and altered transmitter release after protein synthesis inhibition

(2018) Matthew S Scarnati et al.   eLife

Transcriptomic Analysis of Ribosome-Bound mRNA in Cortical NeuritesIn Vivo

(2017) Rebecca Ouwenga et al.   JOURNAL OF NEUROSCIENCE

TrackMate: An open and extensible platform for single-particle tracking

(2017) Jean-Yves Tinevez et al.   METHODS

Synaptic vesicle glycoprotein 2C (SV2C) modulates dopamine release and is disrupted in Parkinson disease

(2017) Amy R. Dunn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Astrocytes locally translate transcripts in their peripheral processes

(2017) Kristina Sakers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dopamine neuron dependent behaviors mediated by glutamate cotransmission

(2017) Susana Mingote et al.   eLife

Golgi-independent secretory trafficking through recycling endosomes in neuronal dendrites and spines

(2017) Aaron B Bowen et al.   eLife

Dynamic Axonal Translation in Developing and Mature Visual Circuits

(2016) Toshiaki Shigeoka et al.   CELL

Specialization of biosynthetic membrane trafficking for neuronal form and function

(2016) Cyril Hanus et al.   CURRENT OPINION IN NEUROBIOLOGY

A heterogeneous population of nuclear-encoded mitochondrial mRNAs is present in the axons of primary sympathetic neurons

(2016) Armaz Aschrafi et al.   MITOCHONDRION

Fluorescent false neurotransmitter reveals functionally silent dopamine vesicle clusters in the striatum

(2016) Daniela B Pereira et al.   NATURE NEUROSCIENCE

Presynaptic Protein Synthesis Is Required for Long-Term Plasticity of GABA Release

(2016) Thomas J. Younts et al.   NEURON

The local expression and trafficking of tyrosine hydroxylase mRNA in the axons of sympathetic neurons

(2016) Noreen M. Gervasi et al.   RNA

Tonic Firing Rate Controls Dendritic Ca2+ Signaling and Synaptic Gain in Substantia Nigra Dopamine Neurons

(2015) T. A. Hage et al.   JOURNAL OF NEUROSCIENCE

Are Striatal Tyrosine Hydroxylase Interneurons Dopaminergic?

(2015) H. S. Xenias et al.   JOURNAL OF NEUROSCIENCE

Identification of neurodegenerative factors using translatome–regulatory network analysis

(2015) Lars Brichta et al.   NATURE NEUROSCIENCE

Diversity of Transgenic Mouse Models for Selective Targeting of Midbrain Dopamine Neurons

(2015) Stephan Lammel et al.   NEURON

Whole transcriptome profiling reveals the RNA content of motor axons

(2015) Michael Briese et al.   NUCLEIC ACIDS RESEARCH

Somatodendritic dopamine release: recent mechanistic insights

(2015) Margaret E. Rice et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Coexistence of glutamatergic spine synapses and shaft synapses in substantia nigra dopamine neurons

(2015) Miae Jang et al.   Scientific Reports

Proteomic screening of glutamatergic mouse brain synaptosomes isolated by fluorescence activated sorting

(2014) Christoph Biesemann et al.   EMBO JOURNAL

Aldehyde dehydrogenase 1 defines and protects a nigrostriatal dopaminergic neuron subpopulation

(2014) Guoxiang Liu et al.   JOURNAL OF CLINICAL INVESTIGATION

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Axonal Transport: Cargo-Specific Mechanisms of Motility and Regulation

(2014) Sandra Maday et al.   NEURON

Defining Midbrain Dopaminergic Neuron Diversity by Single-Cell Gene Expression Profiling

(2014) Jean-Francois Poulin et al.   Cell Reports

Aldehyde Dehydrogenase 1 making molecular inroads into the differential vulnerability of nigrostriatal dopaminergic neuron subtypes in Parkinson’s disease

(2014) Huaibin Cai et al.   Translational Neurodegeneration

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Local gene expression in nerve endings

(2013) Marianna Crispino et al.   Developmental Neurobiology

Seeing the Unseen

(2013) Subhojit Roy   NEUROSCIENTIST

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Alterations in axonal transport motor proteins in sporadic and experimental Parkinson’s disease

(2012) Yaping Chu et al.   BRAIN

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Axonal mRNA localization and local protein synthesis in nervous system assembly, maintenance and repair

(2012) Hosung Jung et al.   NATURE REVIEWS NEUROSCIENCE

The Local Transcriptome in the Synaptic Neuropil Revealed by Deep Sequencing and High-Resolution Imaging

(2012) Iván J. Cajigas et al.   NEURON

Postsynaptic Complexin Controls AMPA Receptor Exocytosis during LTP

(2012) Mohiuddin Ahmad et al.   NEURON

Somatodendritic Dopamine Release Requires Synaptotagmin 4 and 7 and the Participation of Voltage-gated Calcium Channels

(2011) Jose Alfredo Mendez et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RNAscope

(2011) Fay Wang et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

In Vivo Imaging of Intersynaptic Vesicle Exchange Using VGLUT1Venus Knock-In Mice

(2011) E. Herzog et al.   JOURNAL OF NEUROSCIENCE

Transcriptome analysis of embryonic and adult sensory axons reveals changes in mRNA repertoire localization

(2010) L. F. Gumy et al.   RNA

Activity of Neurochemically Heterogeneous Dopaminergic Neurons in the Substantia Nigra during Spontaneous and Driven Changes in Brain State

(2009) M. T. C. Brown et al.   JOURNAL OF NEUROSCIENCE

Single Nigrostriatal Dopaminergic Neurons Form Widely Spread and Highly Dense Axonal Arborizations in the Neostriatum

(2009) W. Matsuda et al.   JOURNAL OF NEUROSCIENCE

Axonal mRNA in Uninjured and Regenerating Cortical Mammalian Axons

(2009) A. M. Taylor et al.   JOURNAL OF NEUROSCIENCE

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

(2009) Linda Madisen et al.   NATURE NEUROSCIENCE

Immunocytochemical identification of proteins involved in dopamine release from the somatodendritic compartment of nigral dopaminergic neurons

(2009) P. Witkovsky et al.   NEUROSCIENCE

Cell-type-specific isolation of ribosome-associated mRNA from complex tissues

(2009) E. Sanz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrastructural analysis of local collaterals of rat ventral tegmental area neurons: GABA phenotype and synapses onto dopamine and GABA cells

(2009) Natalia Omelchenko et al.   SYNAPSE

Ca2+-dependent Activator Proteins of Secretion Promote Vesicular Monoamine Uptake

(2008) Irene Brunk et al.   JOURNAL OF BIOLOGICAL CHEMISTRY