- Home
- Publications
- Publication Search
- Publication Details
Title
Dissecting mammalian spermatogenesis using spatial transcriptomics
Authors
Keywords
-
Journal
Cell Reports
Volume 37, Issue 5, Pages 109915
Publisher
Elsevier BV
Online
2021-11-03
DOI
10.1016/j.celrep.2021.109915
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Robust decomposition of cell type mixtures in spatial transcriptomics
- (2021) Dylan M. Cable et al. NATURE BIOTECHNOLOGY
- Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems
- (2021) Shahar Alon et al. SCIENCE
- Statistical analysis of spatial expression patterns for spatially resolved transcriptomic studies
- (2020) Shiquan Sun et al. NATURE METHODS
- Single-Cell RNA Sequencing of Human, Macaque, and Mouse Testes Uncovers Conserved and Divergent Features of Mammalian Spermatogenesis
- (2020) Adrienne Niederriter Shami et al. DEVELOPMENTAL CELL
- Identifying signaling genes in spatial single cell expression data
- (2020) Dongshunyi Li et al. BIOINFORMATICS
- Highly sensitive spatial transcriptomics at near-cellular resolution with Slide-seqV2
- (2020) Robert R. Stickels et al. NATURE BIOTECHNOLOGY
- Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution
- (2019) Samuel G. Rodriques et al. SCIENCE
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Impaired spermatogenesis associated with changes in spatial arrangement of Sertoli and spermatogonial cells following induced diabetes
- (2019) Ensieh Sajadi et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Hyperglycemia induces spermatogenic disruption via major pathways of diabetes pathogenesis
- (2019) Constanze C. Maresch et al. Scientific Reports
- Leydig cell genes change their expression and association with polysomes in a stage-specific manner in the adult mouse testis†,‡
- (2018) Estela J Jauregui et al. BIOLOGY OF REPRODUCTION
- 50 years of spermatogenesis: Sertoli cells and their interactions with germ cells
- (2018) Michael D Griswold BIOLOGY OF REPRODUCTION
- Third-generationin situhybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust
- (2018) Harry M. T. Choi et al. DEVELOPMENT
- RNF8 and SCML2 cooperate to regulate ubiquitination and H3K27 acetylation for escape gene activation on the sex chromosomes
- (2018) Shannel R. Adams et al. PLoS Genetics
- Single-Cell RNA Sequencing Analysis Reveals Sequential Cell Fate Transition during Human Spermatogenesis
- (2018) Mei Wang et al. Cell Stem Cell
- A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq
- (2018) Christopher Daniel Green et al. DEVELOPMENTAL CELL
- Single-cell RNA sequencing of adult mouse testes
- (2018) Soeren Lukassen et al. Scientific Data
- The adult human testis transcriptional cell atlas
- (2018) Jingtao Guo et al. CELL RESEARCH
- The Mammalian Spermatogenesis Single-Cell Transcriptome, from Spermatogonial Stem Cells to Spermatids
- (2018) Brian P. Hermann et al. Cell Reports
- Testicular organoids: a new model to study the testicular microenvironment in vitro?
- (2017) João Pedro Alves-Lopes et al. HUMAN REPRODUCTION UPDATE
- Developmental origin and maintenance of distinct testicular macrophage populations
- (2017) Noushin Mossadegh-Keller et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Reversed graph embedding resolves complex single-cell trajectories
- (2017) Xiaojie Qiu et al. NATURE METHODS
- Murine and Human Spermatids Are Characterized by Numerous, Newly Synthesized and Differentially Expressed Transcription Factors and Bromodomain-Containing Proteins
- (2016) E. S. Klaus et al. BIOLOGY OF REPRODUCTION
- Regulation of seminiferous tubule-associated stem Leydig cells in adult rat testes
- (2016) Xiaoheng Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulation of microtubule (MT)-based cytoskeleton in the seminiferous epithelium during spermatogenesis
- (2016) Elizabeth I. Tang et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- The effects of diabetes on male fertility and epigenetic regulation during spermatogenesis
- (2015) He-Feng Huang et al. ASIAN JOURNAL OF ANDROLOGY
- The human transcriptome across tissues and individuals
- (2015) M. Mele et al. SCIENCE
- Tissue-based map of the human proteome
- (2015) M. Uhlen et al. SCIENCE
- MERFISHing for spatial context
- (2015) Alex K. Shalek et al. TRENDS IN IMMUNOLOGY
- Macrophages Contribute to the Spermatogonial Niche in the Adult Testis
- (2015) Tony DeFalco et al. Cell Reports
- Contribution of the Two Genes Encoding Histone Variant H3.3 to Viability and Fertility in Mice
- (2015) Michelle C. W. Tang et al. PLoS Genetics
- Human cell growth regulator Ly-1 antibody reactive homologue accelerates processing of preribosomal RNA
- (2014) Naoki Miyazawa et al. GENES TO CELLS
- The human testis-specific proteome defined by transcriptomics and antibody-based profiling
- (2014) D. Djureinovic et al. MOLECULAR HUMAN REPRODUCTION
- The regulation of spermatogenesis by androgens
- (2014) Lee B. Smith et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
- (2012) Guangchuang Yu et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- Concise Review: Spermatogenesis in an Artificial Three-Dimensional System
- (2012) Huleihel Mahmoud STEM CELLS
- Retinoic acid metabolism links the periodical differentiation of germ cells with the cycle of Sertoli cells in mouse seminiferous epithelium
- (2011) Ryo Sugimoto et al. MECHANISMS OF DEVELOPMENT
- The evolution of gene expression levels in mammalian organs
- (2011) David Brawand et al. NATURE
- Spermatogonial stem cell regulation and spermatogenesis
- (2010) B. T. Phillips et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Histone H4 Acetylation is Essential to Proceed from a Histone- to a Protamine-based Chromatin Structure in Spermatid Nuclei ofDrosophila melanogaster
- (2010) Stephan Awe et al. Systems Biology in Reproductive Medicine
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Stage-specific gene expression is a fundamental characteristic of rat spermatogenic cells and Sertoli cells
- (2008) D. S. Johnston et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- DNA Damage Response During Chromatin Remodeling in Elongating Spermatids of Mice1
- (2007) Frédéric Leduc et al. BIOLOGY OF REPRODUCTION
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started