Impact of different types of anthropogenic pollution on bacterial community and metabolic genes in urban river sediments

A Tale of Two Rivers: Can the Restoration Lessons of River Thames (Southern UK) Be Transferred to River Hindon (Northern India)?

(2021) Vasker Sharma et al.   WATER AIR AND SOIL POLLUTION

Effects of different habitats on the bacterial community composition in the water and sediments of Lake Taihu, China

(2020) Wenjie Chang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Predicting disease occurrence with high accuracy based on soil macroecological patterns of Fusarium wilt

(2020) Jun Yuan et al.   ISME Journal

Evidence of selective enrichment of bacterial assemblages and antibiotic resistant genes by microplastics in urban rivers

(2020) Jie Wang et al.   WATER RESEARCH

A novel strategy for enhancing anaerobic biodegradation of an anthraquinone dye reactive blue 19 with resuscitation-promoting factors

(2020) Jiafang Cai et al.   CHEMOSPHERE

Pollution from azithromycin-manufacturing promotes macrolide-resistance gene propagation and induces spatial and seasonal bacterial community shifts in receiving river sediments

(2019) Milena Milaković et al.   ENVIRONMENT INTERNATIONAL

Evaluating the net effect of sulfadimidine on nitrogen removal in an aquatic microcosm environment

(2019) Mei Wang et al.   ENVIRONMENTAL POLLUTION

NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice

(2019) Jingying Zhang et al.   NATURE BIOTECHNOLOGY

Mediation of functional gene and bacterial community profiles in the sediments of eutrophic Chaohu Lake by total nitrogen and season

(2019) Yang-Yang Fan et al.   ENVIRONMENTAL POLLUTION

Urban and agriculturally influenced water contribute differently to the spread of antibiotic resistance genes in a mega-city river network

(2019) Dong Wu et al.   WATER RESEARCH

Network Analysis Reveals Seasonal Patterns of Bacterial Community Networks in Lake Taihu under Aquaculture Conditions

(2019) Lin et al.   Water

Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models

(2018) Aeriel Belk et al.   Genes

Microbial Community Enhances Biodegradation of Bisphenol A Through Selection of Sphingomonadaceae

(2018) Seungdae Oh et al.   MICROBIAL ECOLOGY

Zhongshania marina sp. nov., isolated from deep-sea water

(2018) Young Gwon On et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Characteristics of microbial community indicate anthropogenic impact on the sediments along the Yangtze Estuary and its coastal area, China

(2018) Xing-pan Guo et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Statistical determination of crucial taxa indicative of pollution gradients in sediments of Lake Taihu, China

(2018) Yi Li et al.   ENVIRONMENTAL POLLUTION

Strong impact of anthropogenic contamination on the co-occurrence patterns of a riverine microbial community

(2017) Anyi Hu et al.   ENVIRONMENTAL MICROBIOLOGY

Salt-responsive gut commensal modulates TH17 axis and disease

(2017) Nicola Wilck et al.   NATURE

Illumina-Based Analysis of Bulk and Rhizosphere Soil Bacterial Communities in Paddy Fields Under Mixed Heavy Metal Contamination

(2017) Huaidong HE et al.   PEDOSPHERE

Analysis of the functional gene structure and metabolic potential of microbial community in high arsenic groundwater

(2017) Ping Li et al.   WATER RESEARCH

Meta-analysis of gut microbiome studies identifies disease-specific and shared responses

(2017) Claire Duvallet et al.   Nature Communications

Soil Bacterial Community Structure and Co-occurrence Pattern during Vegetation Restoration in Karst Rocky Desertification Area

(2017) Liang Xue et al.   Frontiers in Microbiology

Bacterial communities in oil contaminated soils: Biogeography and co-occurrence patterns

(2016) Shuo Jiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbiota-based model improves the sensitivity of fecal immunochemical test for detecting colonic lesions

(2016) Nielson T. Baxter et al.   Genome Medicine

Urban rivers as hotspots of regional nitrogen pollution

(2015) Xiaohong Zhang et al.   ENVIRONMENTAL POLLUTION

Bacterioplankton community resilience to ocean acidification: evidence from microbial network analysis

(2015) Yu Wang et al.   ICES JOURNAL OF MARINE SCIENCE

Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes

(2015) Jacob A Cram et al.   ISME Journal

Microbial degradation of linear peptides by strain B-9 of Sphingosinicella and its application in peptide quantification using liquid chromatography-mass spectrometry

(2015) Atsushi Miyachi et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Anthropogenic activities drive the microbial community and its function in urban river sediment

(2015) Xu Zhang et al.   JOURNAL OF SOILS AND SEDIMENTS

A unique assemblage of cosmopolitan freshwater bacteria and higher community diversity differentiate an urbanized estuary from oligotrophic Lake Michigan

(2015) Ryan J. Newton et al.   Frontiers in Microbiology

Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation

(2015) Bo Liang et al.   AMB Express

The Haber Bosch–harmful algal bloom (HB–HAB) link

(2014) Patricia M Glibert et al.   Environmental Research Letters

Hypoxia Sustains Cyanobacteria Blooms in the Baltic Sea

(2014) Carolina P. Funkey et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Mumia flava gen. nov., sp. nov., an actinobacterium of the family Nocardioidaceae

(2014) L.-H. Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Persistent gut microbiota immaturity in malnourished Bangladeshi children

(2014) Sathish Subramanian et al.   NATURE

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Wastewater Treatment Effluent Reduces the Abundance and Diversity of Benthic Bacterial Communities in Urban and Suburban Rivers

(2013) Bradley Drury et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mercury induced community tolerance in microbial biofilms is related to pollution gradients in a long-term polluted river

(2013) Manca Kovac Virsek et al.   AQUATIC TOXICOLOGY

Consequences of human modification of the global nitrogen cycle

(2013) J. W. Erisman et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Influence of natural and novel organic carbon sources on denitrification in forest, degraded urban, and restored streams

(2012) Tamara A. Newcomer et al.   ECOLOGICAL MONOGRAPHS

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Coherent dynamics and association networks among lake bacterioplankton taxa

(2011) Alexander Eiler et al.   ISME Journal

Incidence and diversity of phosphate-solubilising bacteria are linked to phosphorus status in grassland soils

(2011) Carolyn Mander et al.   SOIL BIOLOGY & BIOCHEMISTRY

Denitrifying Bacteria Isolated from Terrestrial Subsurface Sediments Exposed to Mixed-Waste Contamination

(2010) S. J. Green et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

(2010) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks

(2010) E. Thebault et al.   SCIENCE

Characterization of a microbial community capable of reducing perchlorate and nitrate in high salinity

(2009) Jinwook Chung et al.   BIOTECHNOLOGY LETTERS

A comparison of bacteria and benthic invertebrates as indicators of ecological health in streams

(2009) G. LEAR et al.   FRESHWATER BIOLOGY

A safe operating space for humanity

(2009) Johan Rockström et al.   NATURE

Humibacter albus gen. nov., sp. nov., isolated from sewage sludge compost

(2008) I. Vaz-Moreira et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY