The X chromosome dosage compensation program during the development of cynomolgus monkeys

X chromosome inactivation in human development

(2020) Catherine Patrat et al.   DEVELOPMENT

Molecular Mechanisms of Facultative Heterochromatin Formation: An X-Chromosome Perspective

(2020) Jan J. Żylicz et al.   Annual Review of Biochemistry

Female human primordial germ cells display X-chromosome dosage compensation despite the absence of X-inactivation

(2020) Tsotne Chitiashvili et al.   NATURE CELL BIOLOGY

Challenges in unsupervised clustering of single-cell RNA-seq data

(2019) Vladimir Yu Kiselev et al.   NATURE REVIEWS GENETICS

Single‐cell RNA‐seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

(2019) Qing Zhou et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Reconstituting the transcriptome and DNA methylome landscapes of human implantation

(2019) Fan Zhou et al.   NATURE

Sex Chromosome Effects on Male–Female Differences in Mammals

(2018) Daniel M. Snell et al.   CURRENT BIOLOGY

The nuclear matrix protein CIZ1 facilitates localization of Xist RNA to the inactive X-chromosome territory

(2017) Rebeca Ridings-Figueroa et al.   GENES & DEVELOPMENT

Genomic imprinting ofXistby maternal H3K27me3

(2017) Azusa Inoue et al.   GENES & DEVELOPMENT

Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos

(2017) Xinyi Wang et al.   GENOME RESEARCH

Repeat E anchors Xist RNA to the inactive X chromosomal compartment through CDKN1A-interacting protein (CIZ1)

(2017) Hongjae Sunwoo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-cell transcriptome of early embryos and cultured embryonic stem cells of cynomolgus monkeys

(2017) Tomonori Nakamura et al.   Scientific Data

Early X chromosome inactivation during human preimplantation development revealed by single-cell RNA-sequencing

(2017) Joana C. Moreira de Mello et al.   Scientific Reports

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

(2016) Sophie Petropoulos et al.   CELL

The Germ Cell Fate of Cynomolgus Monkeys Is Specified in the Nascent Amnion

(2016) Kotaro Sasaki et al.   DEVELOPMENTAL CELL

A developmental coordinate of pluripotency among mice, monkeys and humans

(2016) Tomonori Nakamura et al.   NATURE

In Vitro Derivation and Propagation of Spermatogonial Stem Cell Activity from Mouse Pluripotent Stem Cells

(2016) Yukiko Ishikura et al.   Cell Reports

The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells

(2015) Fan Guo et al.   CELL

A Unique Gene Regulatory Network Resets the Human Germline Epigenome for Development

(2015) Walfred W.C. Tang et al.   CELL

Robust In Vitro Induction of Human Germ Cell Fate from Pluripotent Stem Cells

(2015) Kotaro Sasaki et al.   Cell Stem Cell

SC3-seq: a method for highly parallel and quantitative measurement of single-cell gene expression

(2015) Tomonori Nakamura et al.   NUCLEIC ACIDS RESEARCH

Validation of noise models for single-cell transcriptomics

(2014) Dominic Grün et al.   NATURE METHODS

X chromosome regulation: diverse patterns in development, tissues and disease

(2014) Xinxian Deng et al.   NATURE REVIEWS GENETICS

The role of maternal-specific H3K9me3 modification in establishing imprinted X-chromosome inactivation and embryogenesis in mice

(2014) Atsushi Fukuda et al.   Nature Communications

XACT, a long noncoding transcript coating the active X chromosome in human pluripotent cells

(2013) Céline Vallot et al.   NATURE GENETICS

Recurrent Variations in DNA Methylation in Human Pluripotent Stem Cells and Their Differentiated Derivatives

(2012) Kristopher L. Nazor et al.   Cell Stem Cell

Erosion of Dosage Compensation Impacts Human iPSC Disease Modeling

(2012) Shila Mekhoubad et al.   Cell Stem Cell

X-chromosome inactivation in monkey embryos and pluripotent stem cells

(2012) Masahito Tachibana et al.   DEVELOPMENTAL BIOLOGY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development

(2011) Ikuhiro Okamoto et al.   NATURE

Vitrification and transfer of cynomolgus monkey (Macaca fascicularis) embryos fertilized by intracytoplasmic sperm injection

(2011) J. Yamasaki et al.   THERIOGENOLOGY

Nuclear Profiles of H3 Histones Trimethylated on Lys27 in Bovine (Bos taurus) Embryos Obtained after In Vitro Fertilization or Somatic Cell Nuclear Transfer

(2010) Amandine BRETON et al.   JOURNAL OF REPRODUCTION AND DEVELOPMENT

Two-Step Imprinted X Inactivation: Repeat versus Genic Silencing in the Mouse

(2010) S. H. Namekawa et al.   MOLECULAR AND CELLULAR BIOLOGY

Dynamic changes in paternal X-chromosome activity during imprinted X-chromosome inactivation in mice

(2009) C. Patrat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

X Chromosome Activity in Mouse XX Primordial Germ Cells

(2008) Susana M. Chuva de Sousa Lopes et al.   PLoS Genetics