Comparative transcriptomic analysis reveals key components controlling spathe color in Anthurium andraeanum (Hort.)

Weighted gene co-expression network analysis identifies genes related to anthocyanin biosynthesis and functional verification of hub gene SmWRKY44

(2021) Yongjun He et al.   PLANT SCIENCE

Identification of new regulators through transcriptome analysis that regulate anthocyanin biosynthesis in apple leaves at low temperatures

(2019) Tingting Song et al.   PLoS One

The R2R3-MYB transcription factor PaMYB10 is involved in anthocyanin biosynthesis in apricots and determines red blushed skin

(2019) Wanpeng Xi et al.   BMC PLANT BIOLOGY

RNA-seq reveals differentially expressed genes in rice (Oryza sativa) roots during interactions with plant-growth promoting bacteria, Azospirillum brasilense

(2019) Jacklyn Thomas et al.   PLoS One

Isolation and Characterization of Three Chalcone Synthase Genes in Pecan (Carya illinoinensis)

(2019) Zhang et al.   Biomolecules

Chalcone Isomerase a Key Enzyme for Anthocyanin Biosynthesis in Ophiorrhiza japonica

(2019) Wei Sun et al.   Frontiers in Plant Science

Molecular mechanisms underlying the diverse array of petal colors in chrysanthemum flowers

(2018) Akemi Ohmiya   BREEDING SCIENCE

Transcriptome analysis reveals potential genes involved in flower pigmentation in a red-flowered mutant of white clover ( Trifolium repens L.)

(2018) Heshan Zhang et al.   GENOMICS

Anthocyanidins and anthocyanins: colored pigments as food, pharmaceutical ingredients, and the potential health benefits

(2017) Hock Eng Khoo et al.   Food & Nutrition Research

Expression Differences of Pigment Structural Genes and Transcription Factors Explain Flesh Coloration in Three Contrasting Kiwifruit Cultivars

(2017) Yanfei Liu et al.   Frontiers in Plant Science

Isolation and characterization of a R2R3-MYB transcription factor gene related to anthocyanin biosynthesis in the spathes of Anthurium andraeanum (Hort.)

(2016) Chonghui Li et al.   PLANT CELL REPORTS

Co-expression of onion chalcone isomerase in Del/Ros1-expressing tomato enhances anthocyanin and flavonol production

(2016) Wansang Lim et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Health benefits of anthocyanins and molecular mechanisms: Update from recent decade

(2015) Daotong Li et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Identification of candidate flavonoid pathway genes using transcriptome correlation network analysis in ripe strawberry (Fragaria×ananassa) fruits

(2015) Jeremy Pillet et al.   JOURNAL OF EXPERIMENTAL BOTANY

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

The Balance of Expression of Dihydroflavonol 4-reductase and Flavonol Synthase Regulates Flavonoid Biosynthesis and Red Foliage Coloration in Crabapples

(2015) Ji Tian et al.   Scientific Reports

Recent advances on the development and regulation of flower color in ornamental plants

(2015) Daqiu Zhao et al.   Frontiers in Plant Science

Phenotype and transcriptome analysis reveals chloroplast development and pigment biosynthesis together influenced the leaf color formation in mutants of Anthurium andraeanum ‘Sonate’

(2015) Yuxia Yang et al.   Frontiers in Plant Science

Molecular and Biochemical Analysis of Chalcone Synthase from Freesia hybrid in Flavonoid Biosynthetic Pathway

(2015) Wei Sun et al.   PLoS One

Selective Pressures Explain Differences in Flower Color among Gentiana lutea Populations

(2015) Mar Sobral et al.   PLoS One

Transcriptome sequencing and metabolite analysis reveals the role of delphinidin metabolism in flower colour in grape hyacinth

(2014) Qian Lou et al.   JOURNAL OF EXPERIMENTAL BOTANY

The oil palm VIRESCENS gene controls fruit colour and encodes a R2R3-MYB

(2014) Rajinder Singh et al.   Nature Communications

Transcriptional regulation of flavonoid biosynthesis in nectarine (Prunus persica) by a set of R2R3 MYB transcription factors

(2013) Daniela Ravaglia et al.   BMC PLANT BIOLOGY

The Case for Anthocyanin Consumption to Promote Human Health: A Review

(2013) Elisa Pojer et al.   COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY

The Color Genes of Speciation in Plants

(2013) Daniel Ortiz-Barrientos   GENETICS

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Functional diversification of duplicated chalcone synthase genes in anthocyanin biosynthesis ofGerbera hybrida

(2013) Xianbao Deng et al.   NEW PHYTOLOGIST

Overexpression of Ps-CHI1, a homologue of the chalcone isomerase gene from tree peony (Paeonia suffruticosa), reduces the intensity of flower pigmentation in transgenic tobacco

(2013) Lin Zhou et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Isolation and Expression Analysis of Anthocyanin Biosynthesis Genes from the Red Chinese Sand Pear, Pyrus pyrifolia Nakai cv. Mantianhong, in Response to Methyl Jasmonate Treatment and UV-B/VIS Conditions

(2013) Minjie Qian et al.   PLANT MOLECULAR BIOLOGY REPORTER

A molecular assessment of the genetic model of spathe color inheritance in Anthurium andraeanum (Hort.)

(2013) David Gopaulchan et al.   PLANTA

The Flavonoid Pathway Regulates the Petal Colors of Cotton Flower

(2013) Jiafu Tan et al.   PLoS One

Pollinator-Mediated Selection on Flower Color, Flower Scent and Flower Morphology of Hemerocallis: Evidence from Genotyping Individual Pollen Grains On the Stigma

(2013) Shun K. Hirota et al.   PLoS One

The Physalis peruviana leaf transcriptome: assembly, annotation and gene model prediction

(2012) Gina A Garzón-Martínez et al.   BMC GENOMICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Pollinator-Mediated Selection on Flower Color Allele Drives Reinforcement

(2012) R. Hopkins et al.   SCIENCE

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae

(2010) Kui Lin-Wang et al.   BMC PLANT BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Anthocyanin Components and Mechanism for Color Development in BlueVeronicaFlowers

(2009) Mihoko MORI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Biosynthesis of plant pigments: anthocyanins, betalains and carotenoids

(2008) Yoshikazu Tanaka et al.   PLANT JOURNAL