Identification of new regulators through transcriptome analysis that regulate anthocyanin biosynthesis in apple leaves at low temperatures

Overexpression of a repressor MdMYB15L negatively regulates anthocyanin and cold tolerance in red-fleshed callus

(2018) Haifeng Xu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Metabolic analyses reveal different mechanisms of leaf color change in two purple-leaf tea plant (Camellia sinensis L.) cultivars

(2018) Jiazhi Shen et al.   Horticulture Research

Malus sieversii: the origin, flavonoid synthesis mechanism, and breeding of red-skinned and red-fleshed apples

(2018) Nan Wang et al.   Horticulture Research

The small ubiquitin-like modifier E3 ligase MdSIZ1 promotes anthocyanin accumulation by sumoylating MdMYB1 under low-temperature conditions in apple

(2017) Li-Jie Zhou et al.   PLANT CELL AND ENVIRONMENT

The OsMYB30 Transcription Factor Suppresses Cold Tolerance by Interacting with a JAZ Protein and Suppressing β -Amylase Expression

(2017) Yan Lv et al.   PLANT PHYSIOLOGY

Characteristics of dihydroflavonol 4-reductase gene promoters from different leaf colored Malus crabapple cultivars

(2017) Ji Tian et al.   Horticulture Research

The bZIP transcription factor MdHY5 regulates anthocyanin accumulation and nitrate assimilation in apple

(2017) Jian-Ping An et al.   Horticulture Research

Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)

(2016) Gladys K. Andino et al.   BMC GENOMICS

CsWRKY46 , a WRKY transcription factor from cucumber, confers cold resistance in transgenic-plant by regulating a set of cold-stress responsive genes in an ABA-dependent manner

(2016) Ying Zhang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana

(2016) Elisa Schulz et al.   Scientific Reports

Genome-wide identification and characterization of MADS-box family genes related to organ development and stress resistance in Brassica rapa

(2015) Gopal Saha et al.   BMC GENOMICS

RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation

(2015) Junpeng Zhan et al.   PLANT CELL

The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis

(2015) Hong Gil Lee et al.   PLANT JOURNAL

Transcription factors and anthocyanin genes related to low-temperature tolerance in rd29A:RdreB1BI transgenic strawberry

(2015) Xianbin Gu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Loss of the R2R3 MYB, AtMyb73, causes hyper-induction of the SOS1 and SOS3 genes in response to high salinity in Arabidopsis

(2013) Jun Hyeok Kim et al.   JOURNAL OF PLANT PHYSIOLOGY

The flavonoid biosynthetic pathway in Arabidopsis: Structural and genetic diversity

(2013) Kazuki Saito et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

DCGL v2.0: An R Package for Unveiling Differential Regulation from Differential Co-expression

(2013) Jing Yang et al.   PLoS One

The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples

(2012) XING-BIN XIE et al.   PLANT CELL AND ENVIRONMENT

Expression analysis in response to low temperature stress in blood oranges: Implication of the flavonoid biosynthetic pathway

(2011) Tiziana Crifò et al.   GENE

Short Cold Storage Enhances the Anthocyanin Contents and Level of Transcripts Related to Their Biosynthesis in Blood Oranges

(2011) Tiziana Crifò et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

A putative functional MYB transcription factor induced by low temperature regulates anthocyanin biosynthesis in purple kale (Brassica Oleracea var. acephala f. tricolor)

(2011) Bin Zhang et al.   PLANT CELL REPORTS

The homologous HD-Zip I transcription factors HaHB1 and AtHB13 confer cold tolerance via the induction of pathogenesis-related and glucanase proteins

(2011) Julieta V. Cabello et al.   PLANT JOURNAL

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

A Novel MYBS3-Dependent Pathway Confers Cold Tolerance in Rice

(2010) C. F. Su et al.   PLANT PHYSIOLOGY

MYB transcription factors in Arabidopsis

(2010) Christian Dubos et al.   TRENDS IN PLANT SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Evidence for a photoprotective function of low-temperature-induced anthocyanin accumulation in apple and pear peel

(2009) Willem J. Steyn et al.   PHYSIOLOGIA PLANTARUM

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Soybean GmMYB76, GmMYB92 and GmMYB177 genes confer stress tolerance in transgenic Arabidopsis plants

(2008) Yong Liao et al.   CELL RESEARCH

Heterosis in the freezing tolerance, and sugar and flavonoid contents of crosses between Arabidopsis thaliana accessions of widely varying freezing tolerance

(2008) MARINA KORN et al.   PLANT CELL AND ENVIRONMENT

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry monitoring of anthocyanins in extracts fromArabidopsis thalianaleaves

(2008) Łukasz Marczak et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

MYB transcription factors that colour our fruit

(2008) Andrew C. Allan et al.   TRENDS IN PLANT SCIENCE