Super resolution microscopy reveals how elongating RNA polymerase II and nascent RNA interact with nucleosome clutches
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Super resolution microscopy reveals how elongating RNA polymerase II and nascent RNA interact with nucleosome clutches
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 50, Issue 1, Pages 175-190
Publisher
Oxford University Press (OUP)
Online
2021-11-26
DOI
10.1093/nar/gkab1215
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Transcription organizes euchromatin via microphase separation
- (2021) Lennart Hilbert et al. Nature Communications
- Transcription-mediated supercoiling regulates genome folding and loop formation
- (2021) Maria Victoria Neguembor et al. MOLECULAR CELL
- Nuclear actin regulates inducible transcription by enhancing RNA polymerase II clustering
- (2020) Mian Wei et al. Science Advances
- Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+
- (2019) Chee-Huat Linus Eng et al. NATURE
- Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms
- (2019) Andrés M. Cardozo Gizzi et al. MOLECULAR CELL
- Super-resolution microscopy reveals how histone tail acetylation affects DNA compaction within nucleosomes in vivo
- (2019) Jason Otterstrom et al. NUCLEIC ACIDS RESEARCH
- Methods for mapping 3D chromosome architecture
- (2019) Rieke Kempfer et al. NATURE REVIEWS GENETICS
- Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus
- (2018) Sofia A. Quinodoz et al. CELL
- Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH
- (2018) Sheel Shah et al. CELL
- Mediator and RNA polymerase II clusters associate in transcription-dependent condensates
- (2018) Won-Ki Cho et al. SCIENCE
- TADs are 3D structural units of higher-order chromosome organization in Drosophila
- (2018) Quentin Szabo et al. Science Advances
- Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
- (2018) Guy Nir et al. PLoS Genetics
- Complex multi-enhancer contacts captured by genome architecture mapping
- (2017) Robert A. Beagrie et al. NATURE
- Super-resolution microscopy with DNA-PAINT
- (2017) Joerg Schnitzbauer et al. Nature Protocols
- (Po)STAC (Polycistronic SunTAg modified CRISPR) enables live-cell and fixed-cell super-resolution imaging of multiple genes
- (2017) Maria V Neguembor et al. NUCLEIC ACIDS RESEARCH
- Nuclear microenvironments modulate transcription from low-affinity enhancers
- (2017) Albert Tsai et al. eLife
- How to rule the nucleus: divide et impera
- (2016) Irina Solovei et al. CURRENT OPINION IN CELL BIOLOGY
- Super-resolution imaging reveals distinct chromatin folding for different epigenetic states
- (2016) Alistair N. Boettiger et al. NATURE
- Spatial organization of chromatin domains and compartments in single chromosomes
- (2016) Siyuan Wang et al. SCIENCE
- ClusterViSu, a method for clustering of protein complexes by Voronoi tessellation in super-resolution microscopy
- (2016) Leonid Andronov et al. Scientific Reports
- RNA Polymerase II cluster dynamics predict mRNA output in living cells
- (2016) Won-Ki Cho et al. eLife
- Chromatin Fibers Are Formed by Heterogeneous Groups of Nucleosomes In Vivo
- (2015) Maria Aurelia Ricci et al. CELL
- The 4D nucleome: Evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments
- (2015) Thomas Cremer et al. FEBS LETTERS
- SR-Tesseler: a method to segment and quantify localization-based super-resolution microscopy data
- (2015) Florian Levet et al. NATURE METHODS
- Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes
- (2015) Brian J. Beliveau et al. Nature Communications
- A Protein-Tagging System for Signal Amplification in Gene Expression and Fluorescence Imaging
- (2014) Marvin E. Tanenbaum et al. CELL
- Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System
- (2013) Baohui Chen et al. CELL
- Spatial organization of RNA polymerase II inside a mammalian cell nucleus revealed by reflected light-sheet superresolution microscopy
- (2013) Z. W. Zhao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Real-Time Dynamics of RNA Polymerase II Clustering in Live Human Cells
- (2013) I. I. Cisse et al. SCIENCE
- TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed
- (2012) Argyris Papantonis et al. EMBO JOURNAL
- Ultrastructural study of transcription factories in mouse erythroblasts
- (2011) C. H. Eskiw et al. JOURNAL OF CELL SCIENCE
- IL-6 induces MUC4 expression through gp130/STAT3 pathway in gastric cancer cell lines
- (2008) Raquel Mejías-Luque et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- RNA polymerase II activity is located on the surface of protein-rich transcription factories
- (2008) C. H. Eskiw et al. JOURNAL OF CELL SCIENCE
- Highly inclined thin illumination enables clear single-molecule imaging in cells
- (2008) Makio Tokunaga et al. NATURE METHODS
- Exploring RNA transcription and turnover in vivo by using click chemistry
- (2008) C. Y. Jao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Three-Dimensional Super-Resolution Imaging by Stochastic Optical Reconstruction Microscopy
- (2008) B. Huang et al. SCIENCE
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now