Spatially Resolved Expression of Transposable Elements in Disease and Somatic Tissue with SpatialTE
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Spatially Resolved Expression of Transposable Elements in Disease and Somatic Tissue with SpatialTE
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 22, Issue 24, Pages 13623
Publisher
MDPI AG
Online
2021-12-20
DOI
10.3390/ijms222413623
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Spatially resolved transcriptomics and its applications in cancer
- (2021) Silas Maniatis et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Integrated analysis of multimodal single-cell data
- (2021) Yuhan Hao et al. CELL
- Locus-specific analysis of Transposable Elements during the progression of ALS in the SOD1G93A mouse model
- (2021) Braulio Valdebenito-Maturana et al. PLoS One
- Differential regulation of transposable elements (TEs) during the murine submandibular gland development
- (2021) Braulio Valdebenito-Maturana et al. Mobile DNA
- Measuring and interpreting transposable element expression
- (2020) Sophie Lanciano et al. NATURE REVIEWS GENETICS
- Single-cell transcriptomics in cancer: computational challenges and opportunities
- (2020) Jean Fan et al. EXPERIMENTAL AND MOLECULAR MEDICINE
- The UCSC Genome Browser database: 2021 update
- (2020) Jairo Navarro Gonzalez et al. NUCLEIC ACIDS RESEARCH
- Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis
- (2019) Silas Maniatis et al. SCIENCE
- Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons
- (2019) Elaine Y. Liu et al. Cell Reports
- Functional evaluation of transposable elements as enhancers in mouse embryonic and trophoblast stem cells
- (2019) Christopher D Todd et al. eLife
- RNA sequencing: the teenage years
- (2019) Rory Stark et al. NATURE REVIEWS GENETICS
- Transposable Elements and Their Epigenetic Regulation in Mental Disorders: Current Evidence in the Field
- (2019) Błażej Misiak et al. Frontiers in Genetics
- TEcandidates: prediction of genomic origin of expressed transposable elements using RNA-seq data
- (2018) Braulio Valdebenito-Maturana et al. BIOINFORMATICS
- Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
- (2018) Emelie Berglund et al. Nature Communications
- L1 retrotransposition in the soma: a field jumping ahead
- (2018) Geoffrey J. Faulkner et al. Mobile DNA
- Spatially resolved transcriptomics enables dissection of genetic heterogeneity in stage III cutaneous malignant melanoma
- (2018) Kim Thrane et al. CANCER RESEARCH
- Tissue degeneration in ALS affected spinal cord evaluated by Raman spectroscopy
- (2018) Gennaro Picardi et al. Scientific Reports
- Retrotransposons in the development and progression of amyotrophic lateral sclerosis
- (2018) Abigail L Savage et al. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY
- Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
- (2016) P. L. Stahl et al. SCIENCE
- TEtranscripts: a package for including transposable elements in differential expression analysis of RNA-seq datasets
- (2015) Ying Jin et al. BIOINFORMATICS
- Polyester: simulating RNA-seq datasets with differential transcript expression
- (2015) Alyssa C. Frazee et al. BIOINFORMATICS
- LINEs in mice: features, families, and potential roles in early development
- (2015) Joanna W. Jachowicz et al. CHROMOSOMA
- Human endogenous retrovirus-K contributes to motor neuron disease
- (2015) Wenxue Li et al. Science Translational Medicine
- L1 Retrotransposons and Somatic Mosaicism in the Brain
- (2014) Sandra R. Richardson et al. Annual Review of Genetics
- Intricate interplay between astrocytes and motor neurons in ALS
- (2013) H. P. Phatnani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Development of the kidney medulla
- (2012) Renfang Song et al. Organogenesis
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now