Oral and gastric microbiome in relation to gastric intestinal metaplasia

Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries

(2021) Hyuna Sung et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Prospective study of oral microbiome and gastric cancer risk among Asian, African American and European American populations

(2021) Yaohua Yang et al.   INTERNATIONAL JOURNAL OF CANCER

Gastric microbes associated with gastric inflammation, atrophy and intestinal metaplasia 1 year after Helicobacter pylori eradication

(2020) Joseph J Y Sung et al.   GUT

Microbiome in Colorectal Cancer: How to Get from Meta-omics to Mechanism?

(2020) Dominik Ternes et al.   TRENDS IN MICROBIOLOGY

Can oral bacteria affect the microbiome of the gut?

(2019) Ingar Olsen et al.   Journal of Oral Microbiology

Benefits and Inputs From Lactic Acid Bacteria and Their Bacteriocins as Alternatives to Antibiotic Growth Promoters During Food-Animal Production

(2019) Nuria Vieco-Saiz et al.   Frontiers in Microbiology

Relating the gut metagenome and metatranscriptome to immunotherapy responses in melanoma patients

(2019) Brandilyn A. Peters et al.   Genome Medicine

Best practices for analysing microbiomes

(2018) Rob Knight et al.   NATURE REVIEWS MICROBIOLOGY

Dynamics of metatranscription in the inflammatory bowel disease gut microbiome

(2018) Melanie Schirmer et al.   Nature Microbiology

Gut microbiota composition and functional changes in inflammatory bowel disease and irritable bowel syndrome

(2018) Arnau Vich Vila et al.   Science Translational Medicine

The Gastric Microbiome Is Perturbed in Advanced Gastric Adenocarcinoma Identified Through Shotgun Metagenomics

(2018) Yuan-Liang Hu et al.   Frontiers in Cellular and Infection Microbiology

Mucosal microbiome dysbiosis in gastric carcinogenesis

(2017) Olabisi Oluwabukola Coker et al.   GUT

Gastric microbial community profiling reveals a dysbiotic cancer-associated microbiota

(2017) Rui M Ferreira et al.   GUT

Corrigendum: Shotgun metagenomics, from sampling to analysis

(2017) Christopher Quince et al.   NATURE BIOTECHNOLOGY

Regularization Paths for Conditional Logistic Regression: TheclogitL1Package

(2015) Stephen Reid et al.   Journal of Statistical Software

UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches

(2014) B. E. Suzek et al.   BIOINFORMATICS

The Fire Within: Microbes Inflame Tumors

(2014) Nicola Gagliani et al.   CELL

Differences in Gastric Mucosal Microbiota Profiling in Patients with Chronic Gastritis, Intestinal Metaplasia, and Gastric Cancer Using Pyrosequencing Methods

(2014) Chang Soo Eun et al.   HELICOBACTER

Newly Identified Pathogens Associated with Periodontitis

(2014) P.J. Pérez-Chaparro et al.   JOURNAL OF DENTAL RESEARCH

Characteristics of gastric cancer according toHelicobacter pyloriinfection status

(2014) Hee-Won Kwak et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis

(2014) Andrew D Fernandes et al.   Microbiome

Association between Selected Oral Pathogens and Gastric Precancerous Lesions

(2013) Christian R. Salazar et al.   PLoS One

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

(2012) Sahar Abubucker et al.   PLoS Computational Biology

Association between oral health and gastric precancerous lesions

(2011) Christian R. Salazar et al.   CARCINOGENESIS

Variations of oral microbiota are associated with pancreatic diseases including pancreatic cancer

(2011) James J Farrell et al.   GUT

Probiotic Mechanism of Lactobacillus gasseri OLL2716 Strain against Helicobacter pylori

(2011) S. Fujimura et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Filifactor alocis interactions with gingival epithelial cells

(2011) C.E. Moffatt et al.   Molecular Oral Microbiology

Lack of Commensal Flora in Helicobacter pylori–Infected INS-GAS Mice Reduces Gastritis and Delays Intraepithelial Neoplasia

(2010) Jennifer L. Lofgren et al.   GASTROENTEROLOGY

REVIEW: Pathogen-induced inflammation at sites distant from oral infection: bacterial persistence and induction of cell-specific innate immune inflammatory pathways

(2010) C. Hayashi et al.   Molecular Oral Microbiology

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE

Helicobacter pylori Eradication Prevents Progression of Gastric Cancer in Hypergastrinemic INS-GAS Mice

(2008) C.-W. Lee et al.   CANCER RESEARCH