Novel and extendable genotyping system for human respiratory syncytial virus based on whole‐genome sequence analysis

Towards a unified classification for human respiratory syncytial virus genotypes

(2020) Kaat Ramaekers et al.   Virus Evolution

Evolution of respiratory syncytial virus genotype BA in Kilifi, Kenya, 15 years on

(2020) Everlyn Kamau et al.   Scientific Reports

Molecular characterization of circulating respiratory syncytial virus genotypes in Pakistani children, 2010–2013

(2019) Uzma Bashir Aamir et al.   Journal of Infection and Public Health

Respiratory syncytial virus A genotype classification based on systematic intergenotypic and intragenotypic sequence analysis

(2019) Juan Carlos Muñoz-Escalante et al.   Scientific Reports

Nextstrain: real-time tracking of pathogen evolution

(2018) James Hadfield et al.   BIOINFORMATICS

A new method for testing evolutionary rate variation and shifts in phenotypic evolution

(2018) Silvia Castiglione et al.   Methods in Ecology and Evolution

Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia

(2018) Francesca Di Giallonardo et al.   Viruses-Basel

Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014

(2017) Jinhua Song et al.   Scientific Reports

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Co-Circulation of 72bp Duplication Group A and 60bp Duplication Group B Respiratory Syncytial Virus (RSV) Strains in Riyadh, Saudi Arabia during 2014

(2016) Anwar Ahmed et al.   PLoS One

Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene

(2016) Seth A. Schobel et al.   Scientific Reports

Conservation of G-Protein Epitopes in Respiratory Syncytial Virus (Group A) Despite Broad Genetic Diversity: Is Antibody Selection Involved in Virus Evolution?

(2015) Alfonsina Trento et al.   JOURNAL OF VIROLOGY

Genetic diversity and evolutionary insights of respiratory syncytial virus A ON1 genotype: global and local transmission dynamics

(2015) Venkata R. Duvvuri et al.   Scientific Reports

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya

(2014) Charles N Agoti et al.   BMC INFECTIOUS DISEASES

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

LABEL: Fast and Accurate Lineage Assignment with Assessment of H5N1 and H9N2 Influenza A Hemagglutinins

(2014) Samuel S. Shepard et al.   PLoS One

Split diversity in constrained conservation prioritization using integer linear programming

(2014) Olga Chernomor et al.   Methods in Ecology and Evolution

Respiratory Syncytial Virus—A Comprehensive Review

(2013) Andrea T. Borchers et al.   CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY

The Comparative Genomics of Human Respiratory Syncytial Virus Subgroups A and B: Genetic Variability and Molecular Evolutionary Dynamics

(2013) L. Tan et al.   JOURNAL OF VIROLOGY

Highly Pathogenic Avian Influenza Virus Subtype H5N1 in Africa: A Comprehensive Phylogenetic Analysis and Molecular Characterization of Isolates

(2009) Giovanni Cattoli et al.   PLoS One