Genome-wide characterization and functional analysis of class III peroxidase gene family in soybean reveal regulatory roles of GsPOD40 in drought tolerance

Effect of Drought Stress at Reproductive Stages on Growth and Nitrogen Metabolism in Soybean

(2020) Yanli Du et al.   Agronomy-Basel

GmNAC8 acts as a positive regulator in soybean drought stress

(2020) Chengfeng Yang et al.   PLANT SCIENCE

Genome-wide identification of the class III POD gene family and their expression profiling in grapevine (Vitis vinifera L)

(2020) Huilin Xiao et al.   BMC GENOMICS

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Genome-Wide Characterization and Expression Analysis of NHX Gene Family under Salinity Stress in Gossypium barbadense and Its Comparison with Gossypium hirsutum

(2020) Umar Akram et al.   Genes

Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

(2020) Liang Wang et al.   BMC PLANT BIOLOGY

Characterization and Rapid Gene-Mapping of Leaf Lesion Mimic Phenotype of spl-1 Mutant in Soybean (Glycine max (L.) Merr.)

(2019) G Al Amin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Overexpression of Peroxidase Gene GsPRX9 Confers Salt Tolerance in Soybean

(2019) Ting Jin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Melatonin Mediated Regulation of Drought Stress: Physiological and Molecular Aspects

(2019) Sharma et al.   Plants-Basel

Genome-wide and evolutionary analysis of the class III peroxidase gene family in wheat and Aegilops tauschii reveals that some members are involved in stress responses

(2019) Jun Yan et al.   BMC GENOMICS

Effect of various drought stresses and subsequent recovery on proline, total soluble sugar and starch metabolisms in Rice (Oryza sativa L.) varieties

(2019) Doan Cong Dien et al.   PLANT PRODUCTION SCIENCE

GmHsp90A2 is involved in soybean heat stress as a positive regulator

(2019) Yanzhong Huang et al.   PLANT SCIENCE

Isolation, purification and characterization of an ascorbate peroxidase from celery and overexpression of the AgAPX1 gene enhanced ascorbate content and drought tolerance in Arabidopsis

(2019) Jie-Xia Liu et al.   BMC PLANT BIOLOGY

RNA-Seq based transcriptomic analysis revealed genes associated with seed-flooding tolerance in wild soybean (Glycine soja Sieb. & Zucc.)

(2019) Ripa Akter Sharmin et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Genomic, molecular evolution, and expression analysis of NOX genes in soybean ( Glycine max)

(2018) Zaibao Zhang et al.   GENOMICS

HMMER web server: 2018 update

(2018) Simon C Potter et al.   NUCLEIC ACIDS RESEARCH

GmWRKY49, a Salt-Responsive Nuclear Protein, Improved Root Length and Governed Better Salinity Tolerance in Transgenic Arabidopsis

(2018) Zhaolong Xu et al.   Frontiers in Plant Science

Oryza sativa class III peroxidase (OsPRX38) overexpression in Arabidopsis thaliana reduces arsenic accumulation due to apoplastic lignification

(2018) Maria Kidwai et al.   JOURNAL OF HAZARDOUS MATERIALS

Peroxidase Activity of Human Hemoproteins: Keeping the Fire under Control

(2018) Irina Vlasova   MOLECULES

Proline Accumulation Influenced by Osmotic Stress in Arbuscular Mycorrhizal Symbiotic Plants

(2018) Se Chul Chun et al.   Frontiers in Microbiology

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Overexpression of a peroxidase gene (AtPrx64) of Arabidopsis thaliana in tobacco improves plant’s tolerance to aluminum stress

(2017) Yuanshuang Wu et al.   PLANT MOLECULAR BIOLOGY

Hierarchically Aligning 10 Legume Genomes Establishes a Family-Level Genomics Platform

(2017) Jinpeng Wang et al.   PLANT PHYSIOLOGY

Genome-Wide Analysis of the PvHsp20 Family in Switchgrass: Motif, Genomic Organization, and Identification of Stress or Developmental-Related Hsp20s

(2017) Haidong Yan et al.   Frontiers in Plant Science

Drought Induced Changes in Growth, Osmolyte Accumulation and Antioxidant Metabolism of Three Maize Hybrids

(2017) Shakeel A. Anjum et al.   Frontiers in Plant Science

Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

(2016) Fulai Zhou et al.   BMC PLANT BIOLOGY

Genome-wide characterization and expression pattern of auxin response factor (ARF) gene family in soybean and common bean

(2016) Bao Le et al.   Genes & Genomics

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reconciling the evolutionary origin of bread wheat (Triticum aestivum )

(2016) Moaine El Baidouri et al.   NEW PHYTOLOGIST

Screening of Bread Wheat Genotypes for Drought Tolerance Using Phenotypic and Proline Analyses

(2016) Learnmore Mwadzingeni et al.   Frontiers in Plant Science

Structural, Evolutionary, and Functional Analysis of the Class III Peroxidase Gene Family in Chinese Pear (Pyrus bretschneideri)

(2016) Yunpeng Cao et al.   Frontiers in Plant Science

Metabolic and diffusional limitations of photosynthesis in fluctuating irradiance in Arabidopsis thaliana

(2016) Elias Kaiser et al.   Scientific Reports

Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis

(2015) Gunvant Patil et al.   BMC GENOMICS

Systematic analysis of maize class III peroxidase gene family reveals a conserved subfamily involved in abiotic stress response

(2015) Yu Wang et al.   GENE

Analysis of Cell Wall-Related Genes in Organs of Medicago sativa L. under Different Abiotic Stresses

(2015) Marc Behr et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Identification of the trehalose-6-phosphate synthase gene family in winter wheat and expression analysis under conditions of freezing stress

(2015) D. W. XIE et al.   JOURNAL OF GENETICS

DCA1 Acts as a Transcriptional Co-activator of DST and Contributes to Drought and Salt Tolerance in Rice

(2015) Long-Gang Cui et al.   PLoS Genetics

Genome-wide survey and comprehensive expression profiling of Aux/IAA gene family in chickpea and soybean

(2015) Vikash K. Singh et al.   Frontiers in Plant Science

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

Effect of Drought on the Gas Exchange, Chlorophyll Fluorescence and Yield of Six Different-Era Spring Wheat Cultivars

(2014) X.-K. Guan et al.   JOURNAL OF AGRONOMY AND CROP SCIENCE

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Subcellular Relocalization and Positive Selection Play Key Roles in the Retention of Duplicate Genes of Populus Class III Peroxidase Family

(2014) L.-L. Ren et al.   PLANT CELL

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation

(2014) Brejnev Muhizi Muhire et al.   PLoS One

The IQD Gene Family in Soybean: Structure, Phylogeny, Evolution and Expression

(2014) Lin Feng et al.   PLoS One

ROS homeostasis in halophytes in the context of salinity stress tolerance

(2013) J. Bose et al.   JOURNAL OF EXPERIMENTAL BOTANY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

TaASR1, a transcription factor gene in wheat, confers drought stress tolerance in transgenic tobacco

(2013) WEI HU et al.   PLANT CELL AND ENVIRONMENT

Identification of a hydrogen peroxide signalling pathway in the control of light-dependent germination in Arabidopsis

(2013) Patricia Lariguet et al.   PLANTA

Genome-wide analysis of the MYB transcription factor superfamily in soybean

(2012) Hai Du et al.   BMC PLANT BIOLOGY

Overexpression of thylakoidal ascorbate peroxidase shows enhanced resistance to chilling stress in tomato

(2012) Ming Duan et al.   JOURNAL OF PLANT PHYSIOLOGY

Genes encoding plant-specific class III peroxidases are responsible for increased cold tolerance of the brassinosteroid-insensitive 1 mutant

(2012) Beg Hab Kim et al.   MOLECULES AND CELLS

The Apoplastic Oxidative Burst Peroxidase in Arabidopsis Is a Major Component of Pattern-Triggered Immunity

(2012) A. Daudi et al.   PLANT CELL

The Function of Introns

(2012) Michal Chorev et al.   Frontiers in Genetics

Involvement of cytosolic ascorbate peroxidase and Cu/Zn-superoxide dismutase for improved tolerance against drought stress

(2011) M. Faize et al.   JOURNAL OF EXPERIMENTAL BOTANY

SMART 7: recent updates to the protein domain annotation resource

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

Phylogeny, topology, structure and functions of membrane-bound class III peroxidases in vascular plants

(2011) Sabine Lüthje et al.   PHYTOCHEMISTRY

Changes in Twelve Homoeologous Genomic Regions in Soybean following Three Rounds of Polyploidy

(2011) Andrew J. Severin et al.   PLANT CELL

Overexpression of 2-cysteine peroxiredoxin enhances tolerance to methyl viologen-mediated oxidative stress and high temperature in potato plants

(2011) Myoung Duck Kim et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The pepper extracellular peroxidase CaPO2 is required for salt, drought and oxidative stress tolerance as well as resistance to fungal pathogens

(2011) Hyong Woo Choi et al.   PLANTA

Ectopic overexpression of vacuolar and apoplastic Catharanthus roseus peroxidases confers differential tolerance to salt and dehydration stress in transgenic tobacco

(2011) Santosh Kumar et al.   PROTOPLASMA

Transcriptional Regulation of ROS Controls Transition from Proliferation to Differentiation in the Root

(2010) Hironaka Tsukagoshi et al.   CELL

In silico analysis of cis-acting regulatory elements in 5′ regulatory regions of sucrose transporter gene families in rice (Oryza sativa Japonica) and Arabidopsis thaliana

(2010) Omodele Ibraheem et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Production and diffusion of chloroplastic H2O2 and its implication to signalling

(2010) Maria M. Mubarakshina et al.   JOURNAL OF EXPERIMENTAL BOTANY

Enhanced disease resistance in transgenic carrot (Daucus carota L.) plants over-expressing a rice cationic peroxidase

(2010) O. Wally et al.   PLANTA

Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition

(2009) Michael Freeling   Annual Review of Plant Biology

Membrane-bound guaiacol peroxidases from maize (Zea mays L.) roots are regulated by methyl jasmonate, salicylic acid, and pathogen elicitors

(2009) Angela Mika et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Over-expression of a Populus peroxisomal ascorbate peroxidase (PpAPX) gene in tobacco plants enhances stress tolerance

(2009) Y-J. Li et al.   PLANT BREEDING

Specific functions of individual class III peroxidase genes

(2008) C. Cosio et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rapidly regulated genes are intron poor

(2008) Daniel C. Jeffares et al.   TRENDS IN GENETICS