Co-occurring microorganisms regulate the succession of cyanobacterial harmful algal blooms

Microbial community successions and their dynamic functions during harmful cyanobacterial blooms in a freshwater lake

(2020) Hanyan Li et al.   WATER RESEARCH

Cyanobacterial blooms alter the relative importance of neutral and selective processes in assembling freshwater bacterioplankton community

(2019) Kai Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cyanobacterial blooms

(2018) Jef Huisman et al.   NATURE REVIEWS MICROBIOLOGY

Seasonal Gene Expression and the Ecophysiological Implications of Toxic Microcystis aeruginosa Blooms in Lake Taihu

(2018) Xiangming Tang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Biodiversity and dynamics of cyanobacterial communities during blooms in temperate lake (Harsha Lake, Ohio, USA)

(2018) Bo Zhu et al.   HARMFUL ALGAE

Newly isolatedNodulariaphage influences cyanobacterial community dynamics

(2017) S. E. Coloma et al.   ENVIRONMENTAL MICROBIOLOGY

mixOmics: An R package for ‘omics feature selection and multiple data integration

(2017) Florian Rohart et al.   PLoS Computational Biology

Nutrient recycling facilitates long-term stability of marine microbial phototroph–heterotroph interactions

(2017) Joseph A. Christie-Oleza et al.   Nature Microbiology

A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp.

(2016) Matthew J. Harke et al.   HARMFUL ALGAE

Plankton networks driving carbon export in the oligotrophic ocean

(2016) Lionel Guidi et al.   NATURE

Fast and sensitive taxonomic classification for metagenomics with Kaiju

(2016) Peter Menzel et al.   Nature Communications

Metagenomic Analysis Reveals Symbiotic Relationship among Bacteria in Microcystis-Dominated Community

(2016) Meili Xie et al.   Frontiers in Microbiology

Microbial players involved in the decline of filamentous and colonial cyanobacterial blooms with a focus on fungal parasitism

(2015) Mélanie Gerphagnon et al.   ENVIRONMENTAL MICROBIOLOGY

Duelling ‘CyanoHABs’: unravelling the environmental drivers controlling dominance and succession among diazotrophic and non-N2 -fixing harmful cyanobacteria

(2015) Hans W. Paerl et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial communities reflect temporal changes in cyanobacterial composition in a shallow ephemeral freshwater lake

(2015) Jason Nicholas Woodhouse et al.   ISME Journal

Cyanate fuels the nitrogen cycle

(2015) Lisa Y. Stein   NATURE

Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria

(2015) S. A. Amin et al.   NATURE

Competition and facilitation between the marine nitrogen-fixing cyanobacterium Cyanothece and its associated bacterial community

(2015) Verena S. Brauer et al.   Frontiers in Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom

(2014) Kevin Penn et al.   ISME Journal

Diversification of CRISPR within coexisting genotypes in a natural population of the bloom-forming cyanobacterium Microcystis aeruginosa

(2014)   MICROBIOLOGY-SGM

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Rising CO2 Levels Will Intensify Phytoplankton Blooms in Eutrophic and Hypertrophic Lakes

(2014) Jolanda M. H. Verspagen et al.   PLoS One

Putative Antiparasite Defensive System Involving Ribosomal and Nonribosomal Oligopeptides in Cyanobacteria of the Genus Planktothrix

(2013) Thomas Rohrlack et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Harmful Cyanobacterial Blooms: Causes, Consequences, and Controls

(2013) Hans W. Paerl et al.   MICROBIAL ECOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

The Role of Nitrogen Fixation in Cyanobacterial Bloom Toxicity in a Temperate, Eutrophic Lake

(2013) Lucas J. Beversdorf et al.   PLoS One

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

(2012) Evguenia Kopylova et al.   BIOINFORMATICS

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Distribution, formation and regulation of gas vesicles

(2012) Felicitas Pfeifer   NATURE REVIEWS MICROBIOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

The role of microcystins in maintaining colonies of bloom-forming Microcystis spp.

(2011) Nanqin Gan et al.   ENVIRONMENTAL MICROBIOLOGY

Defense Islands in Bacterial and Archaeal Genomes and Prediction of Novel Defense Systems

(2011) K. S. Makarova et al.   JOURNAL OF BACTERIOLOGY

The Cyanobacterial Hepatotoxin Microcystin Binds to Proteins and Increases the Fitness of Microcystis under Oxidative Stress Conditions

(2011) Yvonne Zilliges et al.   PLoS One

Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climatic-induced change

(2011) Hans W. Paerl et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Ecological Dynamics of the Toxic Bloom-Forming Cyanobacterium Microcystis aeruginosa and Its Cyanophages in Freshwater

(2008) M. Yoshida et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Eutrophication of lakes cannot be controlled by reducing nitrogen input: Results of a 37-year whole-ecosystem experiment

(2008) D. W. Schindler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA