mixOmics: An R package for ‘omics feature selection and multiple data integration

Mass Spectrometry–Based Metabolomics Identifies Longitudinal Urinary Metabolite Profiles Predictive of Radiation-Induced Cancer

(2016) John A. Cook et al.   CANCER RESEARCH

Key role of lipid management in nitrogen and aroma metabolism in an evolved wine yeast strain

(2016) Stéphanie Rollero et al.   Microbial Cell Factories

Helminth infection promotes colonization resistance via type 2 immunity

(2016) Deepshika Ramanan et al.   SCIENCE

Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet

(2016) Douglas Mahana et al.   Genome Medicine

A molecular classification of human mesenchymal stromal cells

(2016) Florian Rohart et al.   PeerJ

MixMC: A Multivariate Statistical Framework to Gain Insight into Microbial Communities

(2016) Kim-Anh Lê Cao et al.   PLoS One

Multivariate morphological brain signatures predict patients with chronic abdominal pain from healthy control subjects

(2015) Jennifer S. Labus et al.   PAIN

CCA: AnRPackage to Extend Canonical Correlation Analysis

(2015) Ignacio Gonzalez et al.   Journal of Statistical Software

Regularization Paths for Generalized Linear Models via Coordinate Descent

(2015) Jerome Friedman et al.   Journal of Statistical Software

Variable selection for generalized canonical correlation analysis

(2014) A. Tenenhaus et al.   BIOSTATISTICS

Sparse multi-block PLSR for biomarker discovery when integrating data from LC–MS and NMR metabolomics

(2014) İbrahim Karaman et al.   Metabolomics

Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties

(2013) Yuanhua Liu et al.   BMC Systems Biology

A computational pipeline for the development of multi-marker bio-signature panels and ensemble classifiers

(2012) Oliver P Günther et al.   BMC BIOINFORMATICS

Independent Principal Component Analysis for biologically meaningful dimension reduction of large biological data sets

(2012) Fangzhou Yao et al.   BMC BIOINFORMATICS

Visualising associations between paired ‘omics’ data sets

(2012) Ignacio González et al.   BioData Mining

Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

(2011) Kim-Anh Lê Cao et al.   BMC BIOINFORMATICS

The Degrees of Freedom of Partial Least Squares Regression

(2011) Nicole Krämer et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Regularized Generalized Canonical Correlation Analysis

(2011) Arthur Tenenhaus et al.   PSYCHOMETRIKA