Genomic Stability and Phenotypic Characteristics of Industrially Produced Lacticaseibacillus rhamnosus GG in a Yogurt Matrix

Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process

(2020) Marianne Stage et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Invited review: Probiotic yogurt quality criteria, regulatory framework, clinical evidence, and analytical aspects

(2020) Richard Nyanzi et al.   JOURNAL OF DAIRY SCIENCE

Thirty Years of Lactobacillus rhamnosus GG

(2019) Lucio Capurso   JOURNAL OF CLINICAL GASTROENTEROLOGY

Yogurt inhibits intestinal barrier dysfunction in Caco-2 cells by increasing tight junctions

(2017) Kelley K. Putt et al.   Food & Function

Lactobacillus rhamnosus GG Outcompetes Enterococcus faecium via Mucus-Binding Pili: Evidence for a Novel and Heterospecific Probiotic Mechanism

(2016) Hanne L. P. Tytgat et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Polymorphisms, Chromosomal Rearrangements, and Mutator Phenotype Development during Experimental Evolution of Lactobacillus rhamnosus GG

(2016) François P. Douillard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Lactobacillus rhamnosusGG Activation of Dendritic Cells and Neutrophils Depends on the Dose and Time of Exposure

(2016) Shirong Cai et al.   Journal of Immunology Research

Piliation of Lactobacillus rhamnosus GG Promotes Adhesion, Phagocytosis, and Cytokine Modulation in Macrophages

(2015) Cynthia E. Vargas García et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels

(2015) Yongwook Choi et al.   BIOINFORMATICS

Can probiotic yogurt prevent diarrhoea in children on antibiotics? A double-blind, randomised, placebo-controlled study

(2015) M. J. Fox et al.   BMJ Open

Genomic Characterization of Non-Mucus-Adherent Derivatives of Lactobacillus rhamnosus GG Reveals Genes Affecting Pilus Biogenesis

(2014) Pia Rasinkangas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

circlize implements and enhances circular visualization in R

(2014) Zuguang Gu et al.   BIOINFORMATICS

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

(2014) Jeffrey E Barrick et al.   BMC GENOMICS

Towards a better understanding of Lactobacillus rhamnosus GG - host interactions

(2014) Marijke E Segers et al.   Microbial Cell Factories

Genome Instability in Lactobacillus rhamnosus GG

(2013) Wilbert Sybesma et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

QUAST: quality assessment tool for genome assemblies

(2013) Alexey Gurevich et al.   BIOINFORMATICS

The Role of Cell Surface Architecture of Lactobacilli in Host-Microbe Interactions in the Gastrointestinal Tract

(2013) Ranjita Sengupta et al.   MEDIATORS OF INFLAMMATION

Stress-induced mutation via DNA breaks inEscherichia coli: A molecular mechanism with implications for evolution and medicine

(2012) Susan M. Rosenberg et al.   BIOESSAYS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Functional Analysis of Lactobacillus rhamnosus GG Pili in Relation to Adhesion and Immunomodulatory Interactions with Intestinal Epithelial Cells

(2011) Sarah Lebeer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Lactobacillus GG as an immune adjuvant for live-attenuated influenza vaccine in healthy adults: a randomized double-blind placebo-controlled trial

(2011) L E Davidson et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Effect of Food Models and Low-Temperature Storage on the Adhesion of Lactobacillus rhamnosus GG to Caco-2 Cells

(2011) G. Deepika et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Dose-Dependent Immunomodulation of Human Dendritic Cells by the Probiotic Lactobacillus rhamnosus Lcr35

(2011) Bertrand Evrard et al.   PLoS One

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Persistence of probiotic strains in the gastrointestinal tract when administered as capsules, yoghurt, or cheese

(2010) Maija Saxelin et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Exopolysaccharides of Lactobacillus rhamnosus GG form a protective shield against innate immune factors in the intestine

(2010) Sarah Lebeer et al.   Microbial Biotechnology

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Effect of growth time on the surface and adhesion properties of Lactobacillus rhamnosus GG

(2009) G. Deepika et al.   JOURNAL OF APPLIED MICROBIOLOGY

Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein

(2009) M. Kankainen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Toll-like receptor 2 and nucleotide-binding oligomerization domain-2 play divergent roles in the recognition of gut-derived lactobacilli and bifidobacteria in dendritic cells

(2008) Louise Hjerrild Zeuthen et al.   IMMUNOLOGY