Transcriptome analysis reveals rod/cone photoreceptor specific signatures across mammalian retinas
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Transcriptome analysis reveals rod/cone photoreceptor specific signatures across mammalian retinas
Authors
Keywords
-
Journal
HUMAN MOLECULAR GENETICS
Volume -, Issue -, Pages ddw268
Publisher
Oxford University Press (OUP)
Online
2016-08-10
DOI
10.1093/hmg/ddw268
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- BMP Sustains Embryonic Stem Cell Self-Renewal through Distinct Functions of Different Krüppel-like Factors
- (2016) Masato Morikawa et al. Stem Cell Reports
- Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
- (2015) Evan Z. Macosko et al. CELL
- Neural retina identity is specified by lens-derived BMP signals
- (2015) T. Pandit et al. DEVELOPMENT
- Differentiation of human embryonic stem cells into cone photoreceptors through simultaneous inhibition of BMP, TGFβ and Wnt signaling
- (2015) Shufeng Zhou et al. DEVELOPMENT
- Photoreceptor cell fate specification in vertebrates
- (2015) Joseph A. Brzezinski et al. DEVELOPMENT
- Biology and therapy of inherited retinal degenerative disease: insights from mouse models
- (2015) Shobi Veleri et al. Disease Models & Mechanisms
- The role of 11-cis-retinyl esters in vertebrate cone vision
- (2015) Darwin Babino et al. FASEB JOURNAL
- Rax Homeoprotein Regulates Photoreceptor Cell Maturation and Survival in Association with Crx in the Postnatal Mouse Retina
- (2015) Shoichi Irie et al. MOLECULAR AND CELLULAR BIOLOGY
- Transplantation of human embryonic stem cell-derived retinal tissue in two primate models of retinal degeneration
- (2015) Hiroshi Shirai et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Generation of Gene-Modified Cynomolgus Monkey via Cas9/RNA-Mediated Gene Targeting in One-Cell Embryos
- (2014) Yuyu Niu et al. CELL
- Comprehensive analysis of gene expression in human retina and supporting tissues
- (2014) Mingyao Li et al. HUMAN MOLECULAR GENETICS
- Gene Ontology Consortium: going forward
- (2014) NUCLEIC ACIDS RESEARCH
- The UCSC Genome Browser database: 2015 update
- (2014) Kate R. Rosenbloom et al. NUCLEIC ACIDS RESEARCH
- Comparison of the transcriptional landscapes between human and mouse tissues
- (2014) Shin Lin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nephronophthisis and Retinal Degeneration in Tmem218–/– Mice
- (2014) P. Vogel et al. VETERINARY PATHOLOGY
- Generation of three-dimensional retinal tissue with functional photoreceptors from human iPSCs
- (2014) Xiufeng Zhong et al. Nature Communications
- Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes
- (2013) Michael H Farkas et al. BMC GENOMICS
- One-Step Generation of Mice Carrying Mutations in Multiple Genes by CRISPR/Cas-Mediated Genome Engineering
- (2013) Haoyi Wang et al. CELL
- Genome Sequencing Reveals Loci under Artificial Selection that Underlie Disease Phenotypes in the Laboratory Rat
- (2013) Santosh S. Atanur et al. CELL
- The G protein-coupled receptor GPRC5B contributes to neurogenesis in the developing mouse neocortex
- (2013) N. Kurabayashi et al. DEVELOPMENT
- Photoreceptor phagocytosis is mediated by phosphoinositide signaling
- (2013) Debarshi Mustafi et al. FASEB JOURNAL
- Evolutionarily conserved long intergenic non-coding RNAs in the eye
- (2013) Debarshi Mustafi et al. HUMAN MOLECULAR GENETICS
- Systems pharmacology identifies drug targets for Stargardt disease–associated retinal degeneration
- (2013) Yu Chen et al. JOURNAL OF CLINICAL INVESTIGATION
- Heritable gene targeting in the mouse and rat using a CRISPR-Cas system
- (2013) Dali Li et al. NATURE BIOTECHNOLOGY
- New genes as drivers of phenotypic evolution
- (2013) Sidi Chen et al. NATURE REVIEWS GENETICS
- RefSeq: an update on mammalian reference sequences
- (2013) Kim D. Pruitt et al. NUCLEIC ACIDS RESEARCH
- Limitations of the rhesus macaque draft genome assembly and annotation
- (2012) Xiongfei Zhang et al. BMC GENOMICS
- Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species
- (2012) Emily A Hornett et al. BMC GENOMICS
- Inflammatory priming predisposes mice to age-related retinal degeneration
- (2012) Debarshi Mustafi et al. JOURNAL OF CLINICAL INVESTIGATION
- Transcriptional code and disease map for adult retinal cell types
- (2012) Sandra Siegert et al. NATURE NEUROSCIENCE
- The Neuronal Organization of the Retina
- (2012) Richard H. Masland NEURON
- Comparative Analysis of Bat Genomes Provides Insight into the Evolution of Flight and Immunity
- (2012) G. Zhang et al. SCIENCE
- Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues
- (2012) J. Merkin et al. SCIENCE
- When BMP Meets FGF
- (2011) Boris Greber Cell Stem Cell
- Defective photoreceptor phagocytosis in a mouse model of enhanced S-cone syndrome causes progressive retinal degeneration
- (2011) Debarshi Mustafi et al. FASEB JOURNAL
- The evolution of gene expression levels in mammalian organs
- (2011) David Brawand et al. NATURE
- Mouse genomic variation and its effect on phenotypes and gene regulation
- (2011) Thomas M. Keane et al. NATURE
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Global Developmental Gene Expression and Pathway Analysis of Normal Brain Development and Mouse Models of Human Neuronal Migration Defects
- (2011) Tiziano Pramparo et al. PLoS Genetics
- Kruppel-like Factor 4 (Klf4) Prevents Embryonic Stem (ES) Cell Differentiation by Regulating Nanog Gene Expression
- (2010) Peilin Zhang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- De novo assembly and analysis of RNA-seq data
- (2010) Gordon Robertson et al. NATURE METHODS
- Photoreceptor degeneration: genetic and mechanistic dissection of a complex trait
- (2010) Alan F. Wright et al. NATURE REVIEWS GENETICS
- Systematic discovery of nonobvious human disease models through orthologous phenotypes
- (2010) K. L. McGary et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- De novo transcriptome assembly with ABySS
- (2009) I. Birol et al. BIOINFORMATICS
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
- The NCBI BioSystems database
- (2009) Lewis Y. Geer et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2009) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Structure of cone photoreceptors
- (2009) Debarshi Mustafi et al. PROGRESS IN RETINAL AND EYE RESEARCH
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Retinal anatomy and visual performance in a diurnal cone-rich laboratory rodent, the Nile grass rat (Arvicanthis niloticus)
- (2008) Frédéric Gaillard et al. JOURNAL OF COMPARATIVE NEUROLOGY
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- High-throughput functional annotation and data mining with the Blast2GO suite
- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
- The electroretinogram (ERG) of a diurnal cone-rich laboratory rodent, the Nile grass rat (Arvicanthis niloticus)
- (2008) Gregory S. Gilmour et al. VISION RESEARCH
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started