4.7 Review

OMICs, Epigenetics, and Genome Editing Techniques for Food and Nutritional Security

Journal

PLANTS-BASEL
Volume 10, Issue 7, Pages -

Publisher

MDPI
DOI: 10.3390/plants10071423

Keywords

epigenetics; epigenomics; genome sequencing; genomic prediction; omics; plant microbiome; site-directed mutagenesis; transcriptome

Categories

Funding

  1. Ministry of Science and Higher Education of the Russian Federation [075-15-2019-1881]
  2. Russian Science Foundation [20-16-00115, 17-14-01363]
  3. Natural Sciences and Engineering Research Council of Canada (NSERC)
  4. Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy [EXC-2048/1, 390686111, 426557363]
  5. Czech Science Foundation [CZ.02.1.01./0.0/0.0/16_019/0000827, SPP 813103381]
  6. Chilean National Fund for Scientific and Technological Development (FONDECYT) [1201973]
  7. Russian Science Foundation [20-14-18018, 20-16-00115] Funding Source: Russian Science Foundation

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The success of crop breeding and agricultural innovation in the last century led to the Green Revolution, but new challenges like rapid climate change require faster responses and innovative solutions. Utilizing high-throughput technologies and new tools to design new plant genomes will be crucial for increasing agricultural efficiency and facing these challenges.
The incredible success of crop breeding and agricultural innovation in the last century greatly contributed to the Green Revolution, which significantly increased yields and ensures food security, despite the population explosion. However, new challenges such as rapid climate change, deteriorating soil, and the accumulation of pollutants require much faster responses and more effective solutions that cannot be achieved through traditional breeding. Further prospects for increasing the efficiency of agriculture are undoubtedly associated with the inclusion in the breeding strategy of new knowledge obtained using high-throughput technologies and new tools in the future to ensure the design of new plant genomes and predict the desired phenotype. This article provides an overview of the current state of research in these areas, as well as the study of soil and plant microbiomes, and the prospective use of their potential in a new field of microbiome engineering. In terms of genomic and phenomic predictions, we also propose an integrated approach that combines high-density genotyping and high-throughput phenotyping techniques, which can improve the prediction accuracy of quantitative traits in crop species.

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