Continuous Sugarcane Planting Negatively Impacts Soil Microbial Community Structure, Soil Fertility, and Sugarcane Agronomic Parameters

Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

(2021) Yue Liu et al.   Frontiers in Microbiology

Soil Metagenomics Reveals Effects of Continuous Sugarcane Cropping on the Structure and Functional Pathway of Rhizospheric Microbial Community

(2021) Ziqin Pang et al.   Frontiers in Microbiology

Sugarcane monoculture drives microbial community composition, activity and abundance of agricultural-related microorganisms

(2021) Muhammad Tayyab et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Land use change: the barrier for sugarcane sustainability

(2021) Michelle C. A. Picoli et al.   Biofuels Bioproducts & Biorefining-Biofpr

Yield and Quality of Ratoon Sugarcane Are Improved by Applying Potassium under Irrigation to Potassium Deficient Soils

(2021) Rajan Bhatt et al.   Agronomy-Basel

Improvement of Soil Microbial Diversity through Sustainable Agricultural Practices and Its Evaluation by -Omics Approaches: A Perspective for the Environment, Food Quality and Human Safety

(2021) Marta Bertola et al.   Microorganisms

Soil Sickness in Aged Tea Plantation Is Associated With a Shift in Microbial Communities as a Result of Plant Polyphenol Accumulation in the Tea Gardens

(2020) Yasir Arafat et al.   Frontiers in Plant Science

Fungi vs. Fungi in Biocontrol: An Overview of Fungal Antagonists Applied Against Fungal Plant Pathogens

(2020) Kasun M. Thambugala et al.   Frontiers in Cellular and Infection Microbiology

Short-Term Effects of Different Organic Amendments on Soil Fungal Composition

(2019) Muhammad Tayyab et al.   Sustainability

A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application

(2019) Stéphane Compant et al.   Journal of Advanced Research

NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice

(2019) Jingying Zhang et al.   NATURE BIOTECHNOLOGY

Mode of Action of Microbial Biological Control Agents Against Plant Diseases: Relevance Beyond Efficacy

(2019) Jürgen Köhl et al.   Frontiers in Plant Science

Long-Term Monoculture Negatively Regulates Fungal Community Composition and Abundance of Tea Orchards

(2019) Yasir Arafat et al.   Agronomy-Basel

Liming Positively Modulates Microbial Community Composition and Function of Sugarcane Fields

(2019) Ziqin Pang et al.   Agronomy-Basel

Analysis of the succession of structure of the bacteria community in soil from long-term continuous cotton cropping in Xinjiang using high-throughput sequencing

(2018) Zhang Wei et al.   ARCHIVES OF MICROBIOLOGY

Barcoded Pyrosequencing Reveals a Shift in the Bacterial Community in the Rhizosphere and Rhizoplane of Rehmannia glutinosa under Consecutive Monoculture

(2018) Linkun Wu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Composition and diversity of rhizosphere fungal community in Coptis chinensis Franch. continuous cropping fields

(2018) Xuhong Song et al.   PLoS One

Root microbiota shift in rice correlates with resident time in the field and developmental stage

(2018) Jingying Zhang et al.   Science China-Life Sciences

Long-Term Coffee Monoculture Alters Soil Chemical Properties and Microbial Communities

(2018) Qingyun Zhao et al.   Scientific Reports

Effect of Sugarcane Straw and Goat Manure on Soil Nutrient Transformation and Bacterial Communities

(2018) Muhammad Tayyab et al.   Sustainability

Screening of EMS-Induced Drought-Tolerant Sugarcane Mutants Employing Physiological, Molecular and Enzymatic Approaches

(2018) Farghama Khalil et al.   Agronomy-Basel

Inoculation of arbuscular mycorrhizal fungi with plastic mulching in rainfed wheat: A promising farming strategy

(2017) Ying Zhu et al.   FIELD CROPS RESEARCH

Spatial Distribution Patterns of Root-Associated Bacterial Communities Mediated by Root Exudates in Different Aged Ratooning Tea Monoculture Systems

(2017) Yasir Arafat et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Rhizospheric soil and root endogenous fungal diversity and composition in response to continuous Panax notoginseng cropping practices

(2017) Yong Tan et al.   MICROBIOLOGICAL RESEARCH

Analysis of nif H-RNA reveals phylotypes related to Geobacter and Cyanobacteria as important functional components of the N2 -fixing community depending on depth and agricultural use of soil

(2017) Priscila A. Calderoli et al.   MicrobiologyOpen

Bacteria as emerging indicators of soil condition

(2016) Syrie M. Hermans et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Structure of bacterial communities in soil following cover crop and organic fertilizer incorporation

(2016) Adria L. Fernandez et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Microbial communities of an arable soil treated for 8 years with organic and inorganic fertilizers

(2016) Chen Chen et al.   BIOLOGY AND FERTILITY OF SOILS

Variations of rhizosphere bacterial communities in tea (Camellia sinensis L.) continuous cropping soil by high-throughput pyrosequencing approach

(2016) Y.C. Li et al.   JOURNAL OF APPLIED MICROBIOLOGY

A consortium of rhizobacterial strains and biochemical growth elicitors improve cold and drought stress tolerance in rice (Oryza sativa L.)

(2016) K. U. Kakar et al.   PLANT BIOLOGY

Soil acidification and the importance of liming agricultural soils with particular reference to the United Kingdom

(2016) K. W. T. Goulding   SOIL USE AND MANAGEMENT

Analysis of the community compositions of rhizosphere fungi in soybeans continuous cropping fields

(2015) Li Bai et al.   MICROBIOLOGICAL RESEARCH

Arbuscular mycorrhizal fungal communities show low resistance and high resilience to wildfire disturbance

(2015) Xingjia Xiang et al.   PLANT AND SOIL

Accelerated Growth Rate and Increased Drought Stress Resilience of the Model Grass Brachypodium distachyon Colonized by Bacillus subtilis B26

(2015) François Gagné-Bourque et al.   PLoS One

Evaluation of six primer pairs targeting the nuclear rRNA operon for characterization of arbuscular mycorrhizal fungal (AMF) communities using 454 pyrosequencing

(2014) Maarten Van Geel et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing

(2014) Wu Xiong et al.   MICROBIAL ECOLOGY

Microbial Community Diversities and Taxa Abundances in Soils along a Seven-Year Gradient of Potato Monoculture Using High Throughput Pyrosequencing Approach

(2014) Xing Liu et al.   PLoS One

Fungal pathogen accumulation at the expense of plant-beneficial fungi as a consequence of consecutive peanut monoculturing

(2014) Xiao-gang Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of actinobacteria on plant disease suppression and growth promotion

(2013) Sasikumar Arunachalam Palaniyandi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metaproteomic analysis of ratoon sugarcane rhizospheric soil

(2013) Wenxiong Lin et al.   BMC MICROBIOLOGY

Mantel test in population genetics

(2013) José Alexandre F. Diniz-Filho et al.   GENETICS AND MOLECULAR BIOLOGY

16S rRNA-Based PCR-DGGE Analysis of Actinomycete Communities in Fields with Continuous Cotton Cropping in Xinjiang, China

(2013) Wei Zhang et al.   MICROBIAL ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fungal networks in yield-invigorating and -debilitating soils induced by prolonged potato monoculture

(2013) Lihua Lu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Yield response of continuous soybean to one-season crop disturbance in a previous continuous soybean field in Northeast China

(2012) Xiaobing Liu et al.   FIELD CROPS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Fusarium wilt-resistant lines of Brazil banana (Musaspp., AAA) obtained by EMS-induced mutation in a micro-cross-section cultural system

(2012) Y. F. Chen et al.   PLANT PATHOLOGY

16S rRNA Gene Pyrosequencing Reveals Bacterial Dysbiosis in the Duodenum of Dogs with Idiopathic Inflammatory Bowel Disease

(2012) Jan S. Suchodolski et al.   PLoS One

Soil Eukaryotic Microorganism Succession as Affected by Continuous Cropping of Peanut - Pathogenic and Beneficial Fungi were Selected

(2012) Mingna Chen et al.   PLoS One

A Drought Resistance-Promoting Microbiome Is Selected by Root System under Desert Farming

(2012) Ramona Marasco et al.   PLoS One

A new bioorganic fertilizer can effectively control banana wilt by strong colonization with Bacillus subtilis N11

(2011) Nan Zhang et al.   PLANT AND SOIL

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Friends and foes: streptomycetes as modulators of plant disease and symbiosis

(2008) Silvia D. Schrey et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Improved PCR primers for the detection and identification of arbuscular mycorrhizal fungi

(2008) Jaikoo Lee et al.   FEMS MICROBIOLOGY ECOLOGY