Effect of Two Different Sugarcane Cultivars on Rhizosphere Bacterial Communities of Sugarcane and Soybean Upon Intercropping

A balancing act: how plants integrate nitrogen and water signals

(2020) Viviana Araus et al.   JOURNAL OF EXPERIMENTAL BOTANY

Current Progress in Nitrogen Fixing Plants and Microbiome Research

(2020) Kishan Mahmud et al.   Plants-Basel

Rhizosphere microbial diversity and community dynamics during potato cultivation

(2020) Qian Hou et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

PICRUSt2 for prediction of metagenome functions

(2020) Gavin M. Douglas et al.   NATURE BIOTECHNOLOGY

Effects of Drought-Tolerant Ea-DREB2B Transgenic Sugarcane on Bacterial Communities in Soil

(2020) Xiaowen Zhao et al.   Frontiers in Microbiology

Population structure and microbial community diversity of two common tetillid sponges in a tropical reef lagoon

(2020) Jake Ivan P. Baquiran et al.   PeerJ

Long-term lime and gypsum amendment increase nitrogen fixation and decrease nitrification and denitrification gene abundances in the rhizosphere and soil in a tropical no-till intercropping system

(2020) João William Bossolani et al.   GEODERMA

Systems Biology of Plant-Microbiome Interactions

(2019) Patricia A. Rodriguez et al.   Molecular Plant

Influence of deficit irrigation on accumulation and partitioning of sugarcane biomass under drip irrigation in commercial varieties

(2019) Lucas C. Santos et al.   AGRICULTURAL WATER MANAGEMENT

Root exudates: from plant to rhizosphere and beyond

(2019) Vicente Vives-Peris et al.   PLANT CELL REPORTS

Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs

(2019) Eva Spieck et al.   ISME Journal

Effects of rhizoma peanut cultivars ( Arachis glabrata Benth.) on the soil bacterial diversity and predicted function in nitrogen fixation

(2019) Xiao‐Bo Wang et al.   Ecology and Evolution

Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

(2019) Jennifer E. Schmidt et al.   Microbiome

Compound- and context-dependent effects of antibiotics on greenhouse gas emissions from livestock

(2019) Rebecca Danielsson et al.   Royal Society Open Science

Biological Nitrogen Fixation Response to Soil Fertility Is Species-Dependent in Annual Legumes

(2019) J. Romanyà et al.  

Organic amendments shift the phosphorus-correlated microbial co-occurrence pattern in the peanut rhizosphere network during long-term fertilization regimes

(2018) Yan Chen et al.   APPLIED SOIL ECOLOGY

Use of plant growth promoting rhizobacteria (PGPRs) with multiple plant growth promoting traits in stress agriculture: Action mechanisms and future prospects

(2018) Hassan Etesami et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Belowground Interactions Impact the Soil Bacterial Community, Soil Fertility, and Crop Yield in Maize/Peanut Intercropping Systems

(2018) Qisong Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Diazotroph abundance and community composition in an acidic soil in response to aluminum-tolerant and aluminum-sensitive maize (Zea mays L.) cultivars under two nitrogen fertilizer forms

(2018) Chao Wang et al.   PLANT AND SOIL

Soil microbial communities and enzyme activities in sea-buckthorn (Hippophae rhamnoides) plantation at different ages

(2018) Miao Yang et al.   PLoS One

Relationship between Enzyme Activity (Urease-Catalase) and Nutrient Element in Soil Use

(2018) Inci Kravkaz Kuscu et al.   POLISH JOURNAL OF ENVIRONMENTAL STUDIES

Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota

(2018) Lingfei Hu et al.   Nature Communications

Vegetation succession influences soil carbon sequestration in coastal alkali-saline soils in southeast China

(2018) Niu Li et al.   Scientific Reports

Compatibility between Legumes and Rhizobia for the Establishment of a Successful Nitrogen-Fixing Symbiosis

(2018) et al.   Genes

Correction to: Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming

(2018) Kyle Hartman et al.   Microbiome

Microbiomes as Metacommunities: Understanding Host-Associated Microbes through Metacommunity Ecology

(2018) Elizabeth Theresa Miller et al.   TRENDS IN ECOLOGY & EVOLUTION

Plant health: feedback effect of root exudates-rhizobiome interactions

(2018) Oluwaseyi Samuel Olanrewaju et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Rhizospheric and endospheric diazotrophs mediated soil fertility intensification in sugarcane-legume intercropping systems

(2018) Manoj Kumar Solanki et al.   JOURNAL OF SOILS AND SEDIMENTS

How Soil Biota Drive Ecosystem Stability

(2018) Gaowen Yang et al.   TRENDS IN PLANT SCIENCE

Comprehensively Characterizing the Cytological Features of Saccharum spontaneum by the Development of a Complete Set of Chromosome-Specific Oligo Probes

(2018) Zhuang Meng et al.   Frontiers in Plant Science

Plant Growth-Promoting Rhizobacteria: Context, Mechanisms of Action, and Roadmap to Commercialization of Biostimulants for Sustainable Agriculture

(2018) Rachel Backer et al.   Frontiers in Plant Science

Rice root morphological and physiological traits interaction with rhizosphere soil and its effect on methane emissions in paddy fields

(2018) Yun Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Yield advantage and nitrogen fate in an additive maize-soybean relay intercropping system

(2018) Ping Chen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Soil microbial communities are shaped by vegetation type and park age in cities under cold climate

(2017) Nan Hui et al.   ENVIRONMENTAL MICROBIOLOGY

Higher yields and lower methane emissions with new rice cultivars

(2017) Yu Jiang et al.   GLOBAL CHANGE BIOLOGY

Root microbiota drive direct integration of phosphate stress and immunity

(2017) Gabriel Castrillo et al.   NATURE

Factors influencing soil enzyme activity in China’s forest ecosystems

(2017) Haifeng Zheng et al.   PLANT ECOLOGY

Variations in microbial community and ciprofloxacin removal in rhizospheric soils between two cultivars of Brassica parachinensis L.

(2017) Xian-Pei Huang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Plant cultivars imprint the rhizosphere bacterial community composition and association networks

(2017) Yuji Jiang et al.   SOIL BIOLOGY & BIOCHEMISTRY

The biological activities of β-glucosidase, phosphatase and urease as soil quality indicators: a review

(2017) A.T. Adetunji et al.   Journal of Soil Science and Plant Nutrition

Plant Growth Promoting Rhizobacteria in Amelioration of Salinity Stress: A Systems Biology Perspective

(2017) Gayathri Ilangumaran et al.   Frontiers in Plant Science

Effects of long-term cultivation of transgenic Bt rice (Kefeng-6) on soil microbial functioning and C cycling

(2017) Lee Zhaolei et al.   Scientific Reports

Legume crop rotation suppressed nitrifying microbial community in a sugarcane cropping soil

(2017) Chanyarat Paungfoo-Lonhienne et al.   Scientific Reports

Effects of biochar and compost amendments on soil physico-chemical properties and the total community within a temperate agricultural soil

(2016) Ibrahim S. Abujabhah et al.   APPLIED SOIL ECOLOGY

Acidobacteria strains from subdivision 1 act as plant growth-promoting bacteria

(2016) Anna M. Kielak et al.   ARCHIVES OF MICROBIOLOGY

Isolation of Phosphate Solubilizing Bacteria from Maize Rhizosphere and Their Potential for Rock Phosphate Solubilization–Mineralization and Plant Growth Promotion

(2016) M. Manzoor et al.   GEOMICROBIOLOGY JOURNAL

Plant growth-promoting bacterial endophytes

(2016) Gustavo Santoyo et al.   MICROBIOLOGICAL RESEARCH

Role of Plant Growth Promoting Rhizobacteria in Agricultural Sustainability—A Review

(2016) Pravin Vejan et al.   MOLECULES

Plant root-microbe communication in shaping root microbiomes

(2016) Andrew Lareen et al.   PLANT MOLECULAR BIOLOGY

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Networking in the Plant Microbiome

(2016) Marcel G. A. van der Heijden et al.   PLOS BIOLOGY

Intercropping in Sugarcane Cultivation Influenced the Soil Properties and Enhanced the Diversity of Vital Diazotrophic Bacteria

(2016) Manoj Kumar Solanki et al.   Sugar Tech

Illumina MiSeq sequencing investigation on the contrasting soil bacterial community structures in different iron mining areas

(2015) Chen Hong et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Bacterial diversity amplifies nutrient-based plant-soil feedbacks

(2015) Simone Weidner et al.   FUNCTIONAL ECOLOGY

Rhizosphere interactions: root exudates, microbes, and microbial communities

(2014) Xing-Feng Huang et al.   Botany

Effect of plant growth-promoting bacteria (PGPR) and arbuscular mycorrhizal fungi (AMF) inoculation on oats in saline-alkali soil contaminated by petroleum to enhance phytoremediation

(2014) Feifei Xun et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Intercropping Enhances Productivity and Maintains the Most Soil Fertility Properties Relative to Sole Cropping

(2014) Zhi-Gang Wang et al.   PLoS One

Inside the root microbiome: Bacterial root endophytes and plant growth promotion

(2013) Jonathan R. Gaiero et al.   AMERICAN JOURNAL OF BOTANY

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Correction: Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions

(2013) Jacqueline M. Chaparro et al.   PLoS One

The Rhizosphere Selects for Particular Groups of Acidobacteria and Verrucomicrobia

(2013) Ulisses Nunes da Rocha et al.   PLoS One

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Soil Microorganisms Mediating Phosphorus Availability Update on Microbial Phosphorus

(2011) A. E. Richardson et al.   PLANT PHYSIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Soil ecosystem functioning under climate change: plant species and community effects

(2010) Paul Kardol et al.   ECOLOGY

Real-time PCR detection of Holophagae (Acidobacteria) and Verrucomicrobia subdivision 1 groups in bulk and leek (Allium porrum) rhizosphere soils

(2010) Ulisses Nunes da Rocha et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Plant genotype strongly modifies the structure and growth of maize rhizosphere microbial communities

(2010) Manuel Aira et al.   SOIL BIOLOGY & BIOCHEMISTRY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS