Artificial Intelligence Enhances Studies on Inflammatory Bowel Disease

Automatic, computer-aided determination of endoscopic and histological inflammation in patients with mild to moderate ulcerative colitis based on red density

(2020) Peter Bossuyt et al.   GUT

Bacterial Taxa and Functions Are Predictive of Sustained Remission Following Exclusive Enteral Nutrition in Pediatric Crohn’s Disease

(2020) Casey M A Jones et al.   INFLAMMATORY BOWEL DISEASES

High circulating elafin levels are associated with Crohn’s disease-associated intestinal strictures

(2020) Jiani Wang et al.   PLoS One

Quest for the best endoscopic imaging modality for computer-assisted colonic polyp staging

(2019) Georg Wimmer et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Environmental Risk Factors for Inflammatory Bowel Diseases: an Umbrella Review of Meta-analyses

(2019) Daniele Piovani et al.   GASTROENTEROLOGY

Personalised therapy for inflammatory bowel disease

(2019) James J Ashton et al.   LANCET

Deep learning: new computational modelling techniques for genomics

(2019) Gökcen Eraslan et al.   NATURE REVIEWS GENETICS

Application of artificial intelligence in gastroenterology

(2019) Young Joo Yang et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Perspectives on Current and Novel Treatments for Inflammatory Bowel Disease

(2019) Soo-Young Na et al.   Gut and Liver

Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

(2019) Alberto Romagnoni et al.   Scientific Reports

The Role of Genetic Factors in Characterizing Extra-Intestinal Manifestations in Crohn’s Disease Patients: Are Bayesian Machine Learning Methods Improving Outcome Predictions?

(2019) Daniele Bottigliengo et al.   Journal of Clinical Medicine

MAPGI: Accurate identification of anatomical landmarks and diseased tissue in gastrointestinal tract using deep learning

(2019) Timothy Cogan et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Inflammatory Bowel Disease: A Potential Result from the Collusion between Gut Microbiota and Mucosal Immune System

(2019) Bei Yue et al.   Microorganisms

Age at disease onset of inflammatory bowel disease is associated with later extraintestinal manifestations and complications

(2018) Denise Herzog et al.   EUROPEAN JOURNAL OF GASTROENTEROLOGY & HEPATOLOGY

Predicting and explaining inflammation in Crohn’s disease patients using predictive analytics methods and electronic medical record data

(2018) Bhargava K Reddy et al.   Health Informatics Journal

Disagreement Among Gastroenterologists Using the Mayo and Rutgeerts Endoscopic Scores

(2018) Samuel Raimundo Fernandes et al.   INFLAMMATORY BOWEL DISEASES

New treatment options for inflammatory bowel diseases

(2018) Bram Verstockt et al.   JOURNAL OF GASTROENTEROLOGY

Artificial Intelligence in Cardiology

(2018) Kipp W. Johnson et al.   JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY

Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk

(2018) Jian Zhou et al.   NATURE GENETICS

Artificial intelligence, physiological genomics, and precision medicine

(2018) Anna Marie Williams et al.   PHYSIOLOGICAL GENOMICS

IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes

(2018) Yukihide Momozawa et al.   Nature Communications

Multi-omics differentially classify disease state and treatment outcome in pediatric Crohn’s disease

(2018) Gavin M. Douglas et al.   Microbiome

Colonic microRNA Profiles, Identified by a Deep-learning Algorithm, That Predict Responses of Patients With Acute Severe Ulcerative Colitis to Therapy

(2018) Ian Morilla et al.   Clinical Gastroenterology and Hepatology

Artificial Intelligence for Medical Image Analysis: A Guide for Authors and Reviewers

(2018) Joseph R. England et al.   AMERICAN JOURNAL OF ROENTGENOLOGY

A primer on deep learning in genomics

(2018) James Zou et al.   NATURE GENETICS

High-performance medicine: the convergence of human and artificial intelligence

(2018) Eric J. Topol   NATURE MEDICINE

Fully automated diagnostic system with artificial intelligence using endocytoscopy to identify the presence of histologic inflammation associated with ulcerative colitis (with video)

(2018) Yasuharu Maeda et al.   GASTROINTESTINAL ENDOSCOPY

Computer-aided diagnosis for colonoscopy

(2017) Yuichi Mori et al.   ENDOSCOPY

Predicting Hospitalization and Outpatient Corticosteroid Use in Inflammatory Bowel Disease Patients Using Machine Learning

(2017) Akbar K Waljee et al.   INFLAMMATORY BOWEL DISEASES

Machine Learning–Based Gene Prioritization Identifies Novel Candidate Risk Genes for Inflammatory Bowel Disease

(2017) Ofer Isakov et al.   INFLAMMATORY BOWEL DISEASES

Exploring the genetic architecture of inflammatory bowel disease by whole-genome sequencing identifies association at ADCY7

(2017) Yang Luo et al.   NATURE GENETICS

Classification of Paediatric Inflammatory Bowel Disease using Machine Learning

(2017) E. Mossotto et al.   Scientific Reports

Identification of Candidate Genes Related to Inflammatory Bowel Disease Using Minimum Redundancy Maximum Relevance, Incremental Feature Selection, and the Shortest-Path Approach

(2017) Fei Yuan et al.   Biomed Research International

Inferring Crohn’s disease association from exome sequences by integrating biological knowledge

(2016) Chan-Seok Jeong et al.   BMC Medical Genomics

Predicting the types of metabolic pathway of compounds using molecular fragments and sequential minimal optimization

(2016) Lei Chen et al.   COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING

Active learning based segmentation of Crohns disease from abdominal MRI

(2016) Dwarikanath Mahapatra et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Genetic variation in IBD: progress, clues to pathogenesis and possible clinical utility

(2016) Byong Duk Ye et al.   Expert Review of Clinical Immunology

Computer-aided diagnosis in GI endoscopy: looking into the future

(2016) Cadman L. Leggett et al.   GASTROINTESTINAL ENDOSCOPY

Obesity in IBD: epidemiology, pathogenesis, disease course and treatment outcomes

(2016) Siddharth Singh et al.   Nature Reviews Gastroenterology & Hepatology

Seasonal variation in onset and relapse of IBD and a model to predict the frequency of onset, relapse, and severity of IBD based on artificial neural network

(2015) Jiang Chen Peng et al.   INTERNATIONAL JOURNAL OF COLORECTAL DISEASE

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

(2015) Jimmy Z Liu et al.   NATURE GENETICS

Sparse Modeling Reveals miRNA Signatures for Diagnostics of Inflammatory Bowel Disease

(2015) Matthias Hübenthal et al.   PLoS One

From the surface to the single cell: Novel endoscopic approaches in inflammatory bowel disease

(2015) Timo Rath   WORLD JOURNAL OF GASTROENTEROLOGY

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

(2014) Dirk Gevers et al.   Cell Host & Microbe

Treating beyond symptoms with a view to improving patient outcomes in inflammatory bowel diseases

(2014) William J. Sandborn et al.   Journal of Crohns & Colitis

A Comparison of the Performances of an Artificial Neural Network and a Regression Model for GFR Estimation

(2013) Xun Liu et al.   AMERICAN JOURNAL OF KIDNEY DISEASES

Evolving Definitions of Remission in Crohn’s Disease

(2013) Remo Panaccione et al.   INFLAMMATORY BOWEL DISEASES

Combined Serological, Genetic, and Inflammatory Markers Differentiate Non-IBD, Crohnʼs Disease, and Ulcerative Colitis Patients

(2013) Scott Plevy et al.   INFLAMMATORY BOWEL DISEASES

European consensus on the histopathology of inflammatory bowel disease

(2013) F. Magro et al.   Journal of Crohns & Colitis

European evidence based consensus for endoscopy in inflammatory bowel disease

(2013) Vito Annese et al.   Journal of Crohns & Colitis

Support Vector Machine Classifier for Estrogen Receptor Positive and Negative Early-Onset Breast Cancer

(2013) Rosanna Upstill-Goddard et al.   PLoS One

Host–microbe interactions have shaped the genetic architecture of inflammatory bowel disease

(2012) Luke Jostins et al.   NATURE

Genome-wide association studies: inherent limitations and future challenges

(2012) Yan Du et al.   Frontiers of Medicine

Genetics and pathogenesis of inflammatory bowel disease

(2011) Bernard Khor et al.   NATURE

The intestinal microbiota in inflammatory bowel diseases: time to connect with the host

(2010) Harry Sokol et al.   CURRENT OPINION IN GASTROENTEROLOGY