VECTOR: An Integrated Correlation Network Database for the Identification of CeRNA Axes in Uveal Melanoma

LINC00483 Has a Potential Tumor-Suppressor Role in Colorectal Cancer Through Multiple Molecular Axes

(2021) Duilia Brex et al.   Frontiers in Oncology

LncRNA TP73‐AS1 enhances the malignant properties of pancreatic ductal adenocarcinoma by increasing MMP14 expression through miRNA ‐200a sponging

(2021) Haiyan Miao et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

CeRNA regulatory network-based analysis to study the roles of noncoding RNAs in the pathogenesis of intrahepatic cholangiocellular carcinoma

(2020) Weiyu Xu et al.   Aging-US

Expanded encyclopaedias of DNA elements in the human and mouse genomes

(2020) Jill E. Moore et al.   NATURE

LncRNA LINC00518 Acts as an Oncogene in Uveal Melanoma by Regulating an RNA-Based Network

(2020) Cristina Barbagallo et al.   Cancers

Prognostic significance of deregulated microRNAs in uveal melanomas

(2019) Luca Falzone et al.   Molecular Medicine Reports

Linc00518 Contributes to Multidrug Resistance Through Regulating the MiR-199a/MRP1 Axis in Breast Cancer

(2018) Liang Chang et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

LncRNA UCA1, Upregulated in CRC Biopsies and Downregulated in Serum Exosomes, Controls mRNA Expression by RNA-RNA Interactions

(2018) Cristina Barbagallo et al.   Molecular Therapy-Nucleic Acids

LncRNA-CDC6 promotes breast cancer progression and function as ceRNA to target CDC6 by sponging microRNA-215

(2018) Xiaoli Kong et al.   JOURNAL OF CELLULAR PHYSIOLOGY

TransmiR v2.0: an updated transcription factor-microRNA regulation database

(2018) Zhan Tong et al.   NUCLEIC ACIDS RESEARCH

A cautionary tale of sense-antisense gene pairs: independent regulation despite inverse correlation of expression

(2017) Ashish Goyal et al.   NUCLEIC ACIDS RESEARCH

miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions

(2017) Chih-Hung Chou et al.   NUCLEIC ACIDS RESEARCH

DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions

(2017) Dimitra Karagkouni et al.   NUCLEIC ACIDS RESEARCH

Identification and validation long non-coding RNAs of oral squamous cell carcinoma by bioinformatics method

(2017) Meng Yang et al.   Oncotarget

Molecular Crosstalking among Noncoding RNAs: A New Network Layer of Genome Regulation in Cancer

(2017) Marco Ragusa et al.   International Journal of Genomics

Meta-signature LncRNAs serve as novel biomarkers for colorectal cancer: integrated bioinformatics analysis, experimental validation and diagnostic evaluation

(2017) Meiyu Dai et al.   Scientific Reports

Transcriptome-wide analysis of natural antisense transcripts shows their potential role in breast cancer

(2017) Stephane Wenric et al.   Scientific Reports

Distribution of miRNA expression across human tissues

(2016) Nicole Ludwig et al.   NUCLEIC ACIDS RESEARCH

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

(2016) Maxim V. Kuleshov et al.   NUCLEIC ACIDS RESEARCH

Tumor Characteristics, Genetics, Management, and the Risk of Metastasis in Uveal Melanoma

(2016) Erin E. Nichols et al.   Seminars in Ophthalmology

Competing endogenous RNA networks: tying the essential knots for cancer biology and therapeutics

(2015) Avencia Sanchez-Mejias et al.   Journal of Hematology & Oncology

Identification and Validation of Long Noncoding RNA Biomarkers in Human Non–Small-Cell Lung Carcinomas

(2015) Hui Yu et al.   Journal of Thoracic Oncology

Myocyte enhancer factor (MEF)-2 plays essential roles in T-cell transformation associated with HTLV-1 infection by stabilizing complex between Tax and CREB

(2015) Pooja Jain et al.   Retrovirology

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

Long Noncoding RNAs as New Architects in Cancer Epigenetics, Prognostic Biomarkers, and Potential Therapeutic Targets

(2015) Didier Meseure et al.   Biomed Research International

Distinct Transcriptional and Anti-Mycobacterial Profiles of Peripheral Blood Monocytes Dependent on the Ratio of Monocytes: Lymphocytes

(2015) Vivek Naranbhai et al.   EBioMedicine

The Urinary Bladder Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling

(2015) Masato Habuka et al.   PLoS One

Dynamic Trk and G Protein Signalings Regulate Dopaminergic Neurodifferentiation in Human Trophoblast Stem Cells

(2015) Eing-Mei Tsai et al.   PLoS One

Deep sequencing reveals a novel class of bidirectional promoters associated with neuronal genes

(2014) Hai Hu et al.   BMC GENOMICS

Switching of the Relative Dominance Between Feedback Mechanisms in Lipopolysaccharide-Induced NF- B Signaling

(2014) M.-H. Sung et al.   Science Signaling

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

(2013) Edward Y Chen et al.   BMC BIOINFORMATICS

MicroRNAs and other non-coding RNAs as targets for anticancer drug development

(2013) Hui Ling et al.   NATURE REVIEWS DRUG DISCOVERY

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

(2013) Jun-Hao Li et al.   NUCLEIC ACIDS RESEARCH

DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs

(2012) Maria D. Paraskevopoulou et al.   NUCLEIC ACIDS RESEARCH

Extensive relationship between antisense transcription and alternative splicing in the human genome

(2011) A. Sorana Morrissy et al.   GENOME RESEARCH

Cancer epigenetics: above and beyond

(2011) Mariana Brait et al.   TOXICOLOGY MECHANISMS AND METHODS

GABP controls a critical transcription regulatory module that is essential for maintenance and differentiation of hematopoietic stem/progenitor cells

(2010) S. Yu et al.   BLOOD

Subtle distinct regulations of late erythroid molecular events by PI3K/AKT-mediated activation of Spi-1/PU.1 oncogene autoregulation loop

(2010) O Breig et al.   ONCOGENE

Evidence for natural antisense transcript-mediated inhibition of microRNA function

(2010) Mohammad Ali Faghihi et al.   GENOME BIOLOGY

Identification of differentially expressed sense and antisense transcript pairs in breast epithelial tissues

(2009) Anita Grigoriadis et al.   BMC GENOMICS

Epigenetics in cancer

(2009) S. Sharma et al.   CARCINOGENESIS

A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition

(2008) M. Beltran et al.   GENES & DEVELOPMENT