Duplication and Functional Divergence of Branched-Chain Amino Acid Biosynthesis Genes in Aspergillus nidulans

Leucine biosynthesis is required for infection-related morphogenesis and pathogenicity in the rice blast fungus Magnaporthe oryzae

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Linking secondary metabolites to gene clusters through genome sequencing of six diverseAspergillusspecies

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Commercial AHAS-inhibiting herbicides are promising drug leads for the treatment of human fungal pathogenic infections

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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

(2018) Tammi C. Vesth et al.   NATURE GENETICS

Whole-Genome Duplication and Yeast’s Fruitful Way of Life

(2018) Ximena Escalera-Fanjul et al.   TRENDS IN GENETICS

The Zn2Cys6-type transcription factor LeuB cross-links regulation of leucine biosynthesis and iron acquisition in Aspergillus fumigatus

(2018) Nanbiao Long et al.   PLoS Genetics

Diversification of Transcriptional Regulation Determines Subfunctionalization of Paralogous Branched Chain Aminotransferases in the YeastSaccharomyces cerevisiae

(2017) James González et al.   GENETICS

Gene duplication can impart fragility, not robustness, in the yeast protein interaction network

(2017) Guillaume Diss et al.   SCIENCE

Diversification of Transcriptional Regulation Determines Subfunctionalization of Paralogous Branched Chain Aminotransferases in the YeastSaccharomyces cerevisiae

(2017) James González et al.   GENETICS

New Aspercryptins, Lipopeptide Natural Products, Revealed by HDAC Inhibition in Aspergillus nidulans

(2016) Matthew T. Henke et al.   ACS Chemical Biology

Thiamine synthesis regulates the fermentation mechanisms in the fungusAspergillus nidulans

(2016) Motoyuki Shimizu et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Two FgLEU2 Genes with Different Roles in Leucine Biosynthesis and Infection-Related Morphogenesis in Fusarium graminearum

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Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin

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Diversification of Paralogous α-Isopropylmalate Synthases by Modulation of Feedback Control and Hetero-Oligomerization in Saccharomyces cerevisiae

(2015) Geovani López et al.   EUKARYOTIC CELL

Functional roles of a predicted branched chain aminotransferase encoded by the LkBAT1 gene of the yeast Lachancea kluyveri

(2015) Javier Montalvo-Arredondo et al.   FUNGAL GENETICS AND BIOLOGY

Leu1 plays a role in iron metabolism and is required for virulence in Cryptococcus neoformans

(2015) Eunsoo Do et al.   FUNGAL GENETICS AND BIOLOGY

Structural basis for leucine sensing by the Sestrin2-mTORC1 pathway

(2015) R. A. Saxton et al.   SCIENCE

Sestrin2 is a leucine sensor for the mTORC1 pathway

(2015) R. L. Wolfson et al.   SCIENCE

Acetohydroxyacid synthase FgIlv2 and FgIlv6 are involved in BCAA biosynthesis, mycelial and conidial morphogenesis and full virulence in Fusarium graminearum

(2015) Xin Liu et al.   Scientific Reports

Threonine deaminase MoIlv1 is important for conidiogenesis and pathogenesis in the rice blast fungus Magnaporthe oryzae

(2014) Yan Du et al.   FUNGAL GENETICS AND BIOLOGY

FgIlv5 is required for branched-chain amino acid biosynthesis and full virulence in Fusarium graminearum

(2014) X. Liu et al.   MICROBIOLOGY-SGM

Dual DNA binding and coactivator functions ofAspergillus nidulans TamA, a Zn(II)2Cys6 transcription factor

(2014) Damien J. Downes et al.   MOLECULAR MICROBIOLOGY

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Identification and Evaluation of Novel Acetolactate Synthase Inhibitors as Antifungal Agents

(2013) Daryl L. Richie et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Transcriptome analysis of the filamentous fungus Aspergillus nidulans directed to the global identification of promoters

(2013) Christopher Sibthorp et al.   BMC GENOMICS

Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

(2013) Diane O Inglis et al.   BMC MICROBIOLOGY

Regulation of the NADP-glutamate dehydrogenase gene gdhA in Aspergillus nidulans by the Zn(II)2Cys6 transcription factor LeuB

(2013) D. J. Downes et al.   MICROBIOLOGY-SGM

Acetolactate synthases MoIlv2 and MoIlv6 are required for infection-related morphogenesis inMagnaporthe oryzae

(2013) Yan Du et al.   MOLECULAR PLANT PATHOLOGY

TheAspergillusGenome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations

(2013) Gustavo C. Cerqueira et al.   NUCLEIC ACIDS RESEARCH

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Functional Analysis of the Aspergillus nidulans Kinome

(2013) Colin P. De Souza et al.   PLoS One

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

The Aspergillus fumigatus Dihydroxyacid Dehydratase Ilv3A/IlvC Is Required for Full Virulence

(2012) Jason D. Oliver et al.   PLoS One

Accurate prediction of secondary metabolite gene clusters in filamentous fungi

(2012) M. R. Andersen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

(2011) M. B. Arnaud et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces cerevisiae Bat1 and Bat2 Aminotransferases Have Functionally Diverged from the Ancestral-Like Kluyveromyces lactis Orthologous Enzyme

(2011) Maritrini Colón et al.   PLoS One

Mechanism of De Novo Branched-Chain Amino Acid Synthesis as an Alternative Electron Sink in Hypoxic Aspergillus nidulans Cells

(2010) M. Shimizu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

The Fungal Genetics Stock Center: a repository for 50 years of fungal genetics research

(2010) K. McCluskey et al.   JOURNAL OF BIOSCIENCES

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Cytocidal amino acid starvation of Saccharomyces cerevisiae and Candida albicans acetolactate synthase (ilv2 ) mutants is influenced by the carbon source and rapamycin

(2009) J. M. Kingsbury et al.   MICROBIOLOGY-SGM

The CYPome (Cytochrome P450 complement) of Aspergillus nidulans

(2008) Diane E. Kelly et al.   FUNGAL GENETICS AND BIOLOGY

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols