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Title
Potential G-quadruplexes and i-Motifs in the SARS-CoV-2
Authors
Keywords
SARS CoV 2, Genomics, Coronaviruses, Ebola virus, RNA structure, Viral genomics, Viral structure, Human genomics
Journal
PLoS One
Volume 16, Issue 6, Pages e0250654
Publisher
Public Library of Science (PLoS)
Online
2021-06-09
DOI
10.1371/journal.pone.0250654
References
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Note: Only part of the references are listed.- The 2019‐new coronavirus epidemic: Evidence for virus evolution
- (2020) Domenico Benvenuto et al. JOURNAL OF MEDICAL VIROLOGY
- Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study
- (2020) Nanshan Chen et al. LANCET
- Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
- (2020) Chaolin Huang et al. LANCET
- A pneumonia outbreak associated with a new coronavirus of probable bat origin
- (2020) Peng Zhou et al. NATURE
- Another Decade, Another Coronavirus
- (2020) Stanley Perlman NEW ENGLAND JOURNAL OF MEDICINE
- RNA G-Quadruplex Structures Mediate Gene Regulation in Bacteria
- (2020) Xiaolong Shao et al. mBio
- The G-Quadruplex/Helicase World as a Potential Antiviral Approach Against COVID-19
- (2020) Nadia Panera et al. DRUGS
- The proximal origin of SARS-CoV-2
- (2020) Kristian G. Andersen et al. NATURE MEDICINE
- The regulation and functions of DNA and RNA G-quadruplexes
- (2020) Dhaval Varshney et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
- (2020) Martin Bartas et al. Frontiers in Microbiology
- Targeting RNA G‐quadruplex in SARS‐CoV‐2: A Promising Therapeutic Target for COVID‐19?
- (2020) Xiaogang Qu et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- G-Quadruplexes Are Present in Human Coronaviruses Including SARS-CoV-2
- (2020) Haoran Cui et al. Frontiers in Microbiology
- Whole Genome Identification of Potential G-Quadruplexes and Analysis of the G-Quadruplex Binding Domain for SARS-CoV-2
- (2020) Rongxin Zhang et al. Frontiers in Genetics
- Parasitic Protozoa: Unusual Roles for G-Quadruplexes in Early-Diverging Eukaryotes
- (2019) Franck Dumetz et al. MOLECULES
- The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria
- (2019) Martin Bartas et al. MOLECULES
- A Novel G-Quadruplex Binding Protein in Yeast—Slx9
- (2019) Silvia Götz et al. MOLECULES
- Relationship Between G-Quadruplex Sequence Composition in Viruses and Their Hosts
- (2019) Puig Lombardi et al. MOLECULES
- A dynamic i-motif with a duplex stem-loop in the long terminal repeat promoter of the HIV-1 proviral genome modulates viral transcription
- (2019) Emanuela Ruggiero et al. NUCLEIC ACIDS RESEARCH
- The Fifth Domain in the G-Quadruplex-Forming Sequence of the Human NEIL3 Promoter Locks DNA Folding in Response to Oxidative Damage
- (2018) Carla A. Omaga et al. BIOCHEMISTRY
- G-Quadruplex Identification in the Genome of Protozoan Parasites Points to Naphthalene Diimide Ligands as New Antiparasitic Agents
- (2018) Efres Belmonte-Reche et al. JOURNAL OF MEDICINAL CHEMISTRY
- G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy
- (2018) Emanuela Ruggiero et al. NUCLEIC ACIDS RESEARCH
- Identification of G-quadruplex forming sequences in three manatee papillomaviruses
- (2018) Maryam Zahin et al. PLoS One
- Pac1 Signals of Human Herpesviruses Contain a Highly Conserved G-Quadruplex Motif
- (2018) Banhi Biswas et al. ACS Infectious Diseases
- i-Motif DNA: structural features and significance to cell biology
- (2018) Hala Abou Assi et al. NUCLEIC ACIDS RESEARCH
- Case studies on potential G-quadruplex-forming sequences from the bacterial orders Deinococcales and Thermales derived from a survey of published genomes
- (2018) Yun Ding et al. Scientific Reports
- Genome-wide analysis of regulatory G-quadruplexes affecting gene expression in human cytomegalovirus
- (2018) Subramaniyam Ravichandran et al. PLoS Pathogens
- G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide
- (2018) Enrico Lavezzo et al. PLoS Computational Biology
- G4Catchall: A G-quadruplex prediction approach considering atypical features
- (2018) Osman Doluca JOURNAL OF THEORETICAL BIOLOGY
- Prevalent Sequences in the Human Genome Can Form Mini i-Motif Structures at Physiological pH
- (2017) Bartomeu Mir et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Database resources of the National Center for Biotechnology Information
- (2017) et al. NUCLEIC ACIDS RESEARCH
- A G-quadruplex motif in an envelope gene promoter regulates transcription and virion secretion in HBV genotype B
- (2017) Banhi Biswas et al. NUCLEIC ACIDS RESEARCH
- Identification of multiple genomic DNA sequences which form i-motif structures at neutral pH
- (2017) Elisé P. Wright et al. NUCLEIC ACIDS RESEARCH
- G-Quadruplexes: Prediction, Characterization, and Biological Application
- (2017) Chun Kit Kwok et al. TRENDS IN BIOTECHNOLOGY
- Control of bacterial nitrate assimilation by stabilization of G-quadruplex DNA
- (2016) Zoë A. E. Waller et al. CHEMICAL COMMUNICATIONS
- Genome-wide regulatory dynamics of G-quadruplexes in human malaria parasite Plasmodium falciparum
- (2016) Deeksha Bhartiya et al. GENOMICS
- Re-evaluation of G-quadruplex propensity with G4Hunter
- (2016) Amina Bedrat et al. NUCLEIC ACIDS RESEARCH
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- Zika Virus Genomic RNA Possesses Conserved G-Quadruplexes Characteristic of the Flaviviridae Family
- (2016) Aaron M. Fleming et al. ACS Infectious Diseases
- The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand
- (2015) Sara Artusi et al. ANTIVIRAL RESEARCH
- A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence
- (2015) Vineet D Menachery et al. NATURE MEDICINE
- G-quadruplexes and their regulatory roles in biology
- (2015) Daniela Rhodes et al. NUCLEIC ACIDS RESEARCH
- G-Quadruplexes in Pathogens: A Common Route to Virulence Control?
- (2015) Lynne M. Harris et al. PLoS Pathogens
- Coronavirus Host Range Expansion and Middle East Respiratory Syndrome Coronavirus Emergence: Biochemical Mechanisms and Evolutionary Perspectives
- (2015) Kayla M. Peck et al. Annual Review of Virology
- A Role for the Fifth G-Track in G-Quadruplex Forming Oncogene Promoter Sequences during Oxidative Stress: Do These “Spare Tires” Have an Evolved Function?
- (2015) Aaron M. Fleming et al. ACS Central Science
- circlize implements and enhances circular visualization in R
- (2014) Zuguang Gu et al. BIOINFORMATICS
- i-Motif DNA: Structure, stability and targeting with ligands
- (2014) Henry A. Day et al. BIOORGANIC & MEDICINAL CHEMISTRY
- Topology of a DNA G-Quadruplex Structure Formed in the HIV-1 Promoter: A Potential Target for Anti-HIV Drug Development
- (2014) Samir Amrane et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- G-quadruplexes regulate Epstein-Barr virus–encoded nuclear antigen 1 mRNA translation
- (2014) Pierre Murat et al. Nature Chemical Biology
- G-quadruplexes in viruses: function and potential therapeutic applications
- (2014) Mathieu Métifiot et al. NUCLEIC ACIDS RESEARCH
- Fundamental aspects of the nucleic acid i-motif structures
- (2014) S. Benabou et al. RSC Advances
- Human Papillomavirus G-Quadruplexes
- (2013) Katarína Tlučková et al. BIOCHEMISTRY
- A Dynamic G-Quadruplex Region Regulates the HIV-1 Long Terminal Repeat Promoter
- (2013) Rosalba Perrone et al. JOURNAL OF MEDICINAL CHEMISTRY
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- (2013) J.-D. Beaudoin et al. NUCLEIC ACIDS RESEARCH
- Formation of a Unique Cluster of G-Quadruplex Structures in the HIV-1 nef Coding Region: Implications for Antiviral Activity
- (2013) Rosalba Perrone et al. PLoS One
- I-Motif formation in gene promoters: unusually stable formation in sequences complementary to known G-quadruplexes
- (2012) John A. Brazier et al. CHEMICAL COMMUNICATIONS
- 5'-UTR RNA G-quadruplexes: translation regulation and targeting
- (2012) A. Bugaut et al. NUCLEIC ACIDS RESEARCH
- DNA Replication through G-Quadruplex Motifs Is Promoted by the Saccharomyces cerevisiae Pif1 DNA Helicase
- (2011) Katrin Paeschke et al. CELL
- G-Quadruplex DNA Sequences Are Evolutionarily Conserved and Associated with Distinct Genomic Features in Saccharomyces cerevisiae
- (2010) John A. Capra et al. PLoS Computational Biology
- Structural polymorphism of the four-repeat Oxytricha nova telomeric DNA sequences
- (2009) Rashid M. Abu-Ghazalah et al. BIOPHYSICAL CHEMISTRY
- Role for G-Quadruplex RNA Binding by Epstein-Barr Virus Nuclear Antigen 1 in DNA Replication and Metaphase Chromosome Attachment
- (2009) J. Norseen et al. JOURNAL OF VIROLOGY
- The SARS-Unique Domain (SUD) of SARS Coronavirus Contains Two Macrodomains That Bind G-Quadruplexes
- (2009) Jinzhi Tan et al. PLoS Pathogens
- Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription
- (2007) Z. Du et al. GENOME RESEARCH
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