Structural basis for activation of Swi2/Snf2 ATPase RapA by RNA polymerase

Structural visualization of transcription activated by a multidrug-sensing MerR family regulator

(2021) Yang Yang et al.   Nature Communications

Visualization of two architectures in class-II CAP-dependent transcription activation

(2020) Wei Shi et al.   PLOS BIOLOGY

Structural basis of bacterial σ 28 ‐mediated transcription reveals roles of the RNA polymerase zinc‐binding domain

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Structural basis of transcription-translation coupling

(2020) Chengyuan Wang et al.   SCIENCE

Structural basis of transcription-translation coupling and collision in bacteria

(2020) Michael William Webster et al.   SCIENCE

Structural basis of Q-dependent transcription antitermination

(2019) Jing Shi et al.   Nature Communications

Structural basis of Q-dependent antitermination

(2019) Zhou Yin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The conformational changes coupling ATP hydrolysis and translocation in a bacterial DnaB helicase

(2018) Thomas Wiegand et al.   Nature Communications

Structural basis for the initiation of eukaryotic transcription-coupled DNA repair

(2017) Jun Xu et al.   NATURE

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

(2017) Ali Punjani et al.   NATURE METHODS

Addressing preferred specimen orientation in single-particle cryo-EM through tilting

(2017) Yong Zi Tan et al.   NATURE METHODS

UCSF ChimeraX: Meeting modern challenges in visualization and analysis

(2017) Thomas D. Goddard et al.   PROTEIN SCIENCE

Structural basis of bacterial transcription activation

(2017) Bin Liu et al.   SCIENCE

Structure of chromatin remodeler Swi2/Snf2 in the resting state

(2016) Xian Xia et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules

(2016) Haim Ashkenazy et al.   NUCLEIC ACIDS RESEARCH

Structure of chromatin remodeler Swi2/Snf2 in the resting state

(2016) Xian Xia et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Allosteric Activation of Bacterial Swi2/Snf2 (Switch/Sucrose Non-fermentable) Protein RapA by RNA Polymerase

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Alignment of cryo-EM movies of individual particles by optimization of image translations

(2015) John L. Rubinstein et al.   JOURNAL OF STRUCTURAL BIOLOGY

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

(2015) Alexis Rohou et al.   JOURNAL OF STRUCTURAL BIOLOGY

Structural basis for transcription reactivation by RapA

(2015) Bin Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes

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Quantifying the local resolution of cryo-EM density maps

(2013) Alp Kucukelbir et al.   NATURE METHODS

Structural insights into regulation and action of SWI2/SNF2 ATPases

(2011) Glenn Hauk et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Structure of RapA, a Swi2/Snf2 Protein that Recycles RNA Polymerase During Transcription

(2008) Gary Shaw et al.   STRUCTURE