Deep learning methods for automatic segmentation of lower leg muscles and bones from MRI scans of children with and without cerebral palsy

Loss odyssey in medical image segmentation

(2021) Jun Ma et al.   MEDICAL IMAGE ANALYSIS

A survey of the recent architectures of deep convolutional neural networks

(2020) Asifullah Khan et al.   ARTIFICIAL INTELLIGENCE REVIEW

Abdominal multi-organ auto-segmentation using 3D-patch-based deep convolutional neural network

(2020) Hojin Kim et al.   Scientific Reports

Convolutional neural network‐based pelvic floor structure segmentation using magnetic resonance imaging in pelvic organ prolapse

(2020) Fei Feng et al.   MEDICAL PHYSICS

A Bird’s-Eye View of Deep Learning in Bioimage Analysis

(2020) Erik Meijering   Computational and Structural Biotechnology Journal

Automatic prostate and prostate zones segmentation of magnetic resonance images using DenseNet-like U-net

(2020) Nader Aldoj et al.   Scientific Reports

Fully automated 3D segmentation of MR-imaged calf muscle compartments: Neighborhood relationship enhanced fully convolutional network

(2020) Zhihui Guo et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation

(2020) Fabian Isensee et al.   NATURE METHODS

Association of genomic subtypes of lower-grade gliomas with shape features automatically extracted by a deep learning algorithm

(2019) Mateusz Buda et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Muscle architecture in children with cerebral palsy and ankle contractures: an investigation using diffusion tensor imaging

(2019) Arkiev D'Souza et al.   CLINICAL BIOMECHANICS

Deep‐Learning‐Based Neural Tissue Segmentation of MRI in Multiple Sclerosis: Effect of Training Set Size

(2019) Ponnada A. Narayana et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING

Deep CNN ensembles and suggestive annotations for infant brain MRI segmentation

(2019) Jose Dolz et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

A variant form of 3D-UNet for infant brain segmentation

(2019) Saqib Qamar et al.   Future Generation Computer Systems-The International Journal of eScience

3D APA-Net: 3D Adversarial Pyramid Anisotropic Convolutional Network for Prostate Segmentation in MR Images

(2019) Haozhe Jia et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Clinical evaluation of fully automated thigh muscle and adipose tissue segmentation using a U-Net deep learning architecture in context of osteoarthritic knee pain

(2019) Jana Kemnitz et al.   MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE

Automated Muscle Segmentation from Clinical CT Using Bayesian U-Net for Personalized Musculoskeletal Modeling

(2019) Yuta Hiasa et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

UNet++: Redesigning Skip Connections to Exploit Multiscale Features in Image Segmentation

(2019) Zongwei Zhou et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

A survey on deep learning techniques for image and video semantic segmentation

(2018) Alberto Garcia-Garcia et al.   APPLIED SOFT COMPUTING

NiftyNet: a deep-learning platform for medical imaging

(2018) Eli Gibson et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation from CT Volumes

(2018) Xiaomeng Li et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Focal loss for dense object detection

(2018) Tsung-Yi Lin et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

U-Net: deep learning for cell counting, detection, and morphometry

(2018) Thorsten Falk et al.   NATURE METHODS

Deep convolutional neural network and 3D deformable approach for tissue segmentation in musculoskeletal magnetic resonance imaging

(2017) Fang Liu et al.   MAGNETIC RESONANCE IN MEDICINE

A survey on deep learning in medical image analysis

(2017) Geert Litjens et al.   MEDICAL IMAGE ANALYSIS

Heterogeneity of muscle sizes in the lower limbs of children with cerebral palsy

(2016) Geoffrey G. Handsfield et al.   MUSCLE & NERVE

Predicting sample size required for classification performance

(2012) Rosa L Figueroa et al.   BMC Medical Informatics and Decision Making

Medial gastrocnemius muscle volume and fascicle length in children aged 2 to 5 years with cerebral palsy

(2011) LEE BARBER et al.   DEVELOPMENTAL MEDICINE AND CHILD NEUROLOGY

Accurate segmentation of subcutaneous and intermuscular adipose tissue from MR images of the thigh

(2010) Vincenzo Positano et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING

Musculoskeletal MRI segmentation using multi-resolution simplex meshes with medial representations

(2010) Benjamin Gilles et al.   MEDICAL IMAGE ANALYSIS