The ‘black box’ of plant demography: how do seed type, climate and seed fungal communities affect grass seed germination?

Natural Enemies and the Maintenance of Tropical Tree Diversity: Recent Insights and Implications for the Future of Biodiversity in a Changing World

(2020) Liza S. Comita et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

Latitudinal gradients in population growth do not reflect demographic responses to climate

(2020) Megan L. Peterson et al.   ECOLOGICAL APPLICATIONS

Climate manipulations differentially affect plant population dynamics within versus beyond northern range limits

(2020) Paul B. Reed et al.   JOURNAL OF ECOLOGY

Facilitation and competition interact with seed dormancy to affect population dynamics in annual plants

(2019) Lindsay D. Leverett et al.   POPULATION ECOLOGY

Selection for seed size: The unexpected effects of water availability and density

(2018) Eugenio Larios et al.   FUNCTIONAL ECOLOGY

Changes in urban plant phenology in the Pacific Northwest from 1959 to 2016: anthropogenic warming and natural oscillation

(2018) Briana C. Lindh et al.   INTERNATIONAL JOURNAL OF BIOMETEOROLOGY

A tale of ENSO, PDO, and increasing aridity impacts on drought-deciduous shrubs in the Death Valley region

(2018) James R. Ehleringer et al.   OECOLOGIA

The role of water in plant-microbe interactions

(2018) Kyaw Aung et al.   PLANT JOURNAL

Isotopic evidence of biotrophy and unusual nitrogen nutrition in soil-dwelling Hygrophoraceae

(2018) Hans Halbwachs et al.   ENVIRONMENTAL MICROBIOLOGY

Density-dependent disease, life-history trade-offs, and the effect of leaf pathogens on a suite of co-occurring close relatives

(2018) Ingrid M. Parker et al.   JOURNAL OF ECOLOGY

Abiotic and biotic factors affecting crop seed germination and seedling emergence: a conceptual framework

(2018) Jay Ram Lamichhane et al.   PLANT AND SOIL

Evaluating Seeding Methods and Rates for Prairie Restoration

(2018) Cara Applestein et al.   NATURAL AREAS JOURNAL

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

The seed microbiome: Origins, interactions, and impacts

(2017) Eric B. Nelson   PLANT AND SOIL

Challenges and limitations to native species restoration in the Great Basin, USA

(2017) Tony Svejcar et al.   PLANT ECOLOGY

Seed germination in cleistogamous species: theoretical considerations and a literature survey of experimental results

(2017) Jerry M. Baskin et al.   SEED SCIENCE RESEARCH

Seed and Root Endophytic Fungi in a Range Expanding and a Related Plant Species

(2017) Stefan Geisen et al.   Frontiers in Microbiology

Observed and Simulated Spring and Summer Dryness in the United States: The Impact of the Pacific Sea Surface Temperature and Beyond

(2017) Siyu Zhao et al.   JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES

Effect of seed position and soil nutrients on seed mass, germination and seedling growth in Peucedanum oreoselinum (Apiaceae)

(2017) Jeremi Kołodziejek   Scientific Reports

Spatial Ecology of the Fungal GenusXylariain a Tropical Cloud Forest

(2016) Daniel C. Thomas et al.   BIOTROPICA

Can the Tetrazolium Test be Used as an Alternative to the Germination Test in Determining Seed Viability of Grass Species?

(2016) Vanessa N. Soares et al.   CROP SCIENCE

Foliar damage beyond species distributions is partly explained by distance dependent interactions with natural enemies

(2016) Daniel S. W. Katz et al.   ECOLOGY

Enzymatic activity of potential fungal plant pathogens and the effect of their culture filtrates on seed germination and seedling growth of garden cress (Lepidium sativum L.)

(2016) Rafał Ogórek   EUROPEAN JOURNAL OF PLANT PATHOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Editorial special issue: soil, plants and endophytes

(2016) Stéphane Compant et al.   PLANT AND SOIL

Performance of Endophyte Infected Tall Fescue in Europe and North America

(2016) Kari Saikkonen et al.   PLoS One

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Do pathogens limit the distributions of tropical trees across a rainfall gradient?

(2014) Erin R. Spear et al.   JOURNAL OF ECOLOGY

Tall fescue is a potential spillover reservoir host for Alternaria species

(2014) Hannah E. Wilson et al.   MYCOLOGIA

Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome onTriticumandBrassicaseeds

(2014) Matthew G. Links et al.   NEW PHYTOLOGIST

The evolution of seed dormancy: environmental cues, evolutionary hubs, and diversification of the seed plants

(2014) Charles G. Willis et al.   NEW PHYTOLOGIST

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Minimal Persistence of Native Bunchgrasses Seven Years after Seeding following Mastication and Prescribed Fire in Southwestern Oregon, USA

(2014) Laura M. Busby et al.   Fire Ecology

Consequences of Pathogen Spillover for Cheatgrass-Invaded Grasslands: Coexistence, Competitive Exclusion, or Priority Effects

(2013) Erin A. Mordecai   AMERICAN NATURALIST

Improved Selection of Internal Transcribed Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput Profiling of Fungal Communities

(2013) Nicholas A. Bokulich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hyphae of waxcap fungi colonise plant roots

(2013) Hans Halbwachs et al.   Fungal Ecology

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Adaptive Transgenerational Plasticity in an Annual Plant: Grandparental and Parental Drought Stress Enhance Performance of Seedlings in Dry Soil

(2012) Jacob J. Herman et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

The Top 10 fungal pathogens in molecular plant pathology

(2012) RALPH DEAN et al.   MOLECULAR PLANT PATHOLOGY

Fungal endophyte–grass symbioses are rare in the California floristic province and other regions with Mediterranean-influenced climates

(2011) Michelle E. Afkhami   Fungal Ecology

Demographic processes limiting seedling recruitment in arid grassland restoration

(2011) Jeremy J. James et al.   JOURNAL OF APPLIED ECOLOGY

Dormancy and Germination Pre-Treatments in Willamette Valley Native Plants

(2011) Michael Russell   NORTHWEST SCIENCE

Restoring Invaded Pacific Northwest Prairies: Management Recommendations from a Region-Wide Experiment

(2011) Amanda G. Stanley et al.   NORTHWEST SCIENCE

Historical Vegetation of the Willamette Valley, Oregon, circa 1850

(2011) John A. Christy et al.   NORTHWEST SCIENCE

A seed bank pathogen causes seedborne disease:Pyrenophora semeniperdaon undispersed grass seeds in western North America

(2010) Susan E. Meyer et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Accelerated seedling emergence in interspecific competitive neighbourhoods

(2010) A.R. Dyer et al.   ECOLOGY LETTERS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The quick and the deadly: growth vs virulence in a seed bank pathogen

(2010) Susan E. Meyer et al.   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Seed Pathology Progress in Academia and Industry

(2009) Gary P. Munkvold   Annual Review of Phytopathology

Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages

(2009) Leho Tedersoo et al.   MYCORRHIZA

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Generalized linear mixed models: a practical guide for ecology and evolution

(2009) Benjamin M. Bolker et al.   TRENDS IN ECOLOGY & EVOLUTION